>PF07668 (320 residues) PKLKSSINLSGSLDKIFDAKNSSSSNTNSLIAQEIKNNLDKSFDNASDLEKVNNLSISVD GGFSGGVTWGNKQYDQNIGWGKETVGNEILYGSSLDQFNISSLDDFKSQLNNDTKLKDII SKSDASKFDSTATYSIASGSNLGLVGDNLVHVNVIETDASSNTKSIDLQIPISNINLNVS NMIVSVSGDNVETQTNKTTNFSYNVGISDQSQFTNPVDAPVASASEVKSANKILVKLGYA EVAANNQITLNQDLLKEELGIYNVTFSNANASIAPNGSTTDGTTGSYKISLDATPTPNKD FVWEDGTSDTKPVSFNVNVS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PKLKSSINLSGSLDKIFDAKNSSSSNTNSLIAQEIKNNLDKSFDNASDLEKVNNLSISVDGGFSGGVTWGNKQYDQNIGWGKETVGNEILYGSSLDQFNISSLDDFKSQLNNDTKLKDIISKSDASKFDSTATYSIASGSNLGLVGDNLVHVNVIETDASSNTKSIDLQIPISNINLNVSNMIVSVSGDNVETQTNKTTNFSYNVGISDQSQFTNPVDAPVASASEVKSANKILVKLGYAEVAANNQITLNQDLLKEELGIYNVTFSNANASIAPNGSTTDGTTGSYKISLDATPTPNKDFVWEDGTSDTKPVSFNVNVS | |||||||||||||||||||
1 | 4b5zA | 0.09 | 0.08 | 3.18 | 1.05 | Neff-PPAS | ------------VTSKVTVEIGSIEGHNNTNKVEPHAGQRAVLKYKLKFENGLHQGDYFDFTLSNNVNTHGVSTARKVPEIKNGSVVMATGEVLEGKIRYTFTNDIEDKVDVTAELENLFIDPKTVQTNGNQTITSTLNKYKDGIGNYYANLNGSIETFNKANNRFSHVAFIKPNNGKTTSVTVTGTLMKGSNQNGNQPKVRIFEYLGNNEDIAKSVYANTTDTSKFKEVTSNMSGN--LNLQNNGSYSLNIENLDKTYVVYDGEY------------LNGTDEVDFRTQMVGHPEQLYKY----YYDRGYTLTWDNGLV | |||||||||||||
2 | 5ay6A | 0.07 | 0.06 | 2.46 | 1.04 | PROSPECTOR2 | KTTRVGVNAPVAAAVSYKVGTAGSPSKTNVVDSATNSHNYDVVGIANPVSGNNEYLVDIKENDAATNELVSSTIDYKGASPVTGSMTTTRINAAGTTVN---LADLGIVNASGADDAEV-VAGKLYDPSTWSMSDYAKDNSKGVKPDFEVQIPLSDSKGGQRTVTLSMLKGPGPNQWY---AELRAKPGDLANNGNGQIS-TGIIEFTTDGKLKNTGSLFGTT------------------------------------SPTAITIKSSGYIAPTVTPPAVQPPTPPTQEVQIDLASAAGGLTQYNSQS---VVQSVNTN | |||||||||||||
3 | 5njlA | 0.14 | 0.10 | 3.55 | 0.75 | SPARKS-K | -------------------QVKKETITKTELVSKVRDLMSQKYTGGSQVGQ-PIYEIKVGETLSKLKIITNIDELEKLALGENKELIVTITDNSANEVVAEATE----KYENSADLSAEANSITAKTETNGADVKASYDS-----AKDKLVITLRDKTDTVTSKTIEIGIGDEKIDLTANPVDIVKLGVAGAKNIDDVQLAEITIKNSDLNTVS---------------PQDLY---------DGYRLT---VKGNMVANG-------TSKSIS-DISSKDSETGKYKFTIKYTD------------ASGKAIELTVEST | |||||||||||||
4 | 5a1uE2 | 0.12 | 0.07 | 2.67 | 0.55 | FFAS-3D | ----------------------------------------------------------------------------------------------------TRQEIFQEQLAAVPEFQGLGPPEPVALTESETEYVIR-CTKHTFSDHLVFQFDCTNTLNDQTLENVTVQMPARSLPYNQPGTCYTLVALPTEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEVNFEAAWDEVGDEFETLSTIKTLEEGNIVKFLGMHPC----------ERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLLLDTVTMQVTA- | |||||||||||||
5 | 1czdA | 0.10 | 0.05 | 1.88 | 0.33 | HHpred | --------------------------------TALLKNSGIMLKSGQFIMTRAVNEANISDVIDDYSLVNEISQSE-DGNIKIAARSTIFWPAADPSIPFPV-ASAVTEIKA-EDLQQLLRVSRGLQ---IDTIAITV-------KEGKIVINGFNKSALDGENTFNFIINMANMKMQPGNYKLLLWAKGAAKFEGEH--ANYVVALEADSTHDF--------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 4mboA | 0.11 | 0.10 | 3.52 | 0.82 | MUSTER | GKVSSELQKVNI--ALKDNTLSEPGTVKLDSSENLVLNFA--FS----IASVNEFTVKLSDNLDTQGIGTILKVQDIMD-ETGQLLATGSYSPLTHNITY--------------TWTRYASTLNNIKARVNMPVWPDQRII---SKTTSDKQCFTAT--NNQVASIEERVQYNSSVTEHTNVKTNVRSR-IMKLDDERQTETYITQIGKEMYFASGLGNSDGSPVNLLNAEKILK-TNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSIS-STTSYVVLVKIP-QSGVLYSTVSDINQTYGSKYSYGHT | |||||||||||||
7 | 3t2lA | 0.11 | 0.06 | 2.28 | 0.83 | CNFpred | ---------------------------------------------------------------------DNRKYVYSGHWGPPTANDTIYLVGN--DADVCAYYPYKDSYTDKT----------------VIPLQSQDYV-----TEDIYYALNTMINGFTPAITFDMVHAYSLVELKIS-SKITLKNSN------LIKKGTINIAVDGSIHSSETGNYDLTTVTDA------------------SPHTLS--------ESYVCRVLMIPVPLKIERTDAEGGEFGLSVSLVIDGQ-SELGEFRQ----GEKYVIGLKIK | |||||||||||||
8 | 1czdA2 | 0.12 | 0.04 | 1.42 | 0.68 | HHsearch-2 | ----------------------------------------------------------------------------------------IPFPVA----------SAVTEIKA-EDLQQLLRVSRGLQI---DTIAITV-------KEGKIVINGFNKSAGDGENTFNFIINMANMKMQPGNYKLLLWAKGAAKFEGEH--ANYVVALEADSTHDF--------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2bsgA | 0.09 | 0.09 | 3.34 | 1.03 | Neff-PPAS | -QYGSEGSMNRPTVSVLRNVEVLDKNIGIL-----KTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELKHRIINNTDVITSQGITIEVGNLREELVYSRLNEIDTKQTTVESDISAIKTSI-SIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKD | |||||||||||||
10 | 1b8hA2 | 0.14 | 0.04 | 1.50 | 0.55 | HHsearch | -----------------------------------------------------------------------------------------QFPV--A--------SVITEIKA-EDLQQLLRVSRGLQI---DTIAITN-------KDGKIVINGYNKSGLDGSNNFNFVINMANMKIQPGNYKVMLWGAVAAKFESSQ--VSYVIAMEADSTHDF--------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |