Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | PIDAFILHRLEAQQLKPSPEADRTTLIRRLSLDLTGLPPSVKQVQEFLADTKPGAYERLVDRLLASPHYGERWARHWLDVARYADSNGFTIDGPRSIWKYRDWVIEAINANMPFDQFVTEQLAGDLLPKPTTEQLIATGFHRNTLINQEGGTNPEQFRVEAVVDRVNTTGAAFLGLTVGCAQCHKHKYDPITQRDFYQLYAIFNSTA |
1 | 5cwfA | 0.15 | 0.12 | 4.05 | 0.77 | SPARKS-K | | ----------------------------MSDEMKKVMEALKKAVELAKKNNDERAAKEIVEALRENNS--DEMAKVMLALAKAVAAKNNDDEVAREIARAAAEIVEALRENNS-DEMAKVMLALALLAAKNNDDEVAREIARAAAEIVEARENNSDEMAKKMLELAKRVLDAAKNNDDETAREIARQAAEEVEAD------------ |
2 | 3rm5A2 | 0.11 | 0.09 | 3.33 | 0.71 | FFAS-3D | | PGGNFYEYLINHPKVKPHDSYINHEFVKKVA---DGTLE-RKKFQFFIEQPCLEDMEKELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGALRAYSRYFNDVSRRGNWQELVAGEALTKMKGKVTAPEGSVYHEWCETY------ASSWYREAMDEGEKLLNHIL------------------ETYPPEQLDTLVTIYAE-- |
3 | 5y6pa2 | 0.11 | 0.07 | 2.42 | 0.28 | HHpred | | -----------IFEFCKNQPADTYQILRAIYRQVFERDINTHNLEKAFLLNEIT-VQEVIEYLGCSKLYTKEFYLGTKHFL--GRA-------PSNQAEIRYYN--QILASQGQVSFIKTLVNSKNIVPYRFPTLPAANFPNTQK-------------------------------------------------------------- |
4 | 5cwbA | 0.13 | 0.12 | 4.02 | 0.66 | MUSTER | | RRVAEKVERLKRSGTSEDEIAEEVAREISEVIRTLGS--SYEVICECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSYEVCECVARIVAEIVEALKRSGTSEDEIAEIVARVI-----------SEVIRTLKESGSSYEVIKECVQRIVEEIVEALKRS---TSEDEIN------EIVRRVKSEVERTLKESGS |
5 | 4c9bB | 0.11 | 0.09 | 3.11 | 0.72 | CNFpred | | AYQRMSWEALKKS---------INGLINKVNISN-----ISIIIQELLQENIVRGRGLLSRSVLQAQIFTHVYAALVAIINSKFP---------QIGELILKRLILNFRKG-TASKFVAHLINQNVA-----HEVLCLEMLTLLL------ERPTDDSVEVAIGFLKECGLKLTQV---------------SPRGINAIFERLRNIL |
6 | 3pruC | 0.14 | 0.08 | 2.81 | 0.58 | HHsearch-2 | | ----------RPVELRPDFSLDDAKVIRAVYRQVLGNDYILKGAESLLTNGSIS-VREFVRTVAKSELYKKKFLTRVIELNYLGRA-------PFSEDEVIFHLD--LYENQGFDADIDSYIDSVEY---------QENF-GENIVPYYRFN--------N---------------------------------------------- |
7 | 5cwqA | 0.09 | 0.09 | 3.46 | 0.67 | Neff-PPAS | | RESEEAERRLQEA-RKRSEEARERGDLKELAEALIEEARAVQELARVACERGN---SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVEQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARR |
8 | 3pruC | 0.16 | 0.07 | 2.24 | 0.85 | HHsearch | | YILKGAESLLTNGSISFLYNNFQTRVIELNYKHLLGRAPFEDEVIFHLDLYENQGFDADIDSYIDSVEYQENFGEN---------IVPY----YRFN-N------------------------------------------------------------------------------------------------------------ |
9 | 3floA2 | 0.17 | 0.09 | 2.86 | 0.66 | SP3 | | ------------------------------------YPNTSQELQEFQANLEGSS-LKVI-------------------VT-----CGYFANDNFSLELLQEFIDSINNEVKP-HVLI---MFGPFIDITH--PLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKT----------------------IS-----------PHIQ |
10 | 3zq6A | 0.06 | 0.06 | 2.69 | 0.71 | PROSPECTOR2 | | AFKDLTALWMARSGKEIGHTIDPEVAMEEYQAKLASMSPGIDEFLRYMTTDEYDHTLRLLSFPEIMDSWVGKMIKIRRQIGSMAKAFKNILPFMGDEEEEDRALQDMEATKKQINAAREVMSDPERTIPEEMSIYESERAMKALELPEESDCEFCNARRKLQQERLKQIREKFSDKVV--AEVPLLKKEAKGIETLEKIAELYGEPE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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