Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ARRSNDFIRYLIENSPQRWTFLNRLKNNISASTSSLTLRREWFKMLDVISNKTSPEITDREVQDVARACLFKINSILKDPTVAPERKEELLKYVASYYDSSPDVWVEAIQQEVFLQNTLNPQII |
1 | 5hiuA1 | 0.12 | 0.10 | 3.72 | 0.74 | SPARKS-K | | SPEQADLVAKLKNGHLERVLAANKLRFAVVDFPLN-PVHAIWHAAKDMIHPENP--------DNARQASWELLIECVKYPNSTELERSEYFHTLTGPAHSKDFCYQLVALEQLTNHGRN----- |
2 | 3o2qA2 | 0.15 | 0.15 | 4.88 | 0.82 | FFAS-3D | | ----KVALQWMVKSRVISWDMVSAMAGDIILDSDNDGIRTHAIKFVEGLIPRDHPYIQYNVLWEEGKAALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTL- |
3 | 3tj1A2 | 0.15 | 0.11 | 3.81 | 0.36 | HHpred | | --------------------ILTLVSTHVEEQVTSGEGVGVFNTLTTLFKTHVLPTYYTRSIQELMDSFLVTLIDISFAVNEAAEKKIKSLQYLGSYIARAKFPFLKNYKILMK---------- |
4 | 3s4wA1 | 0.06 | 0.06 | 2.44 | 0.67 | MUSTER | | TDKTTDKLQEFLQTLKDD-----DLASLLQNQAVKRAVGTLLRAVLKGSP------CSEEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPPLLVDLASDFVGAVREDRLVNG |
5 | 3m1iC | 0.12 | 0.12 | 4.24 | 0.60 | CNFpred | | EEIMISKLARQIDGSEWSWHNINTLSWAIGSISSEDTEKRFVVTVIKDLLDKKRGKDNKAVVASDIMYVVGQYPRFLKA---HWNFLRTVILKLFEFMHTHEGVQDMACDTFIKIVQKCKYHFV |
6 | 6gmhQ | 0.15 | 0.14 | 4.64 | 0.45 | HHsearch-2 | | KENASQCFEKVLKAYPNNYETMKILGSLYAASED-QEKR---DIAKGHLKKVTEQYPDDVEAWELAQIAYGTATRILQQADVPP----EILNNVGAHFRLGNLGEAKKYFLASDRAKAHDEHYI |
7 | 1jt0A2 | 0.04 | 0.04 | 2.06 | 0.71 | Neff-PPAS | | ---ESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGL |
8 | 6fkfd1 | 0.15 | 0.10 | 3.53 | 0.59 | HHsearch | | --------------------VDSTASRYASALA-------------DVADVTGTLEATNSDVEKLIRIFEEPVYYFFANPVISIDNKRSVLDEIITTSGLQP-HTANFINI--LIDSERINLV- |
9 | 2i0fA | 0.12 | 0.11 | 3.98 | 0.70 | SP3 | | ARFYDDLADALLD------GAKAALDEADVVTVPGAEIPATISFALDGADNGGTERGETYHFDIVSNESCRALTDLSVEESIAVENEEQAWVHARREDKDKGGFAARAALTMIGLRKKFGA--- |
10 | 5h7cA3 | 0.10 | 0.10 | 3.61 | 0.58 | PROSPECTOR2 | | EATDKELVIYIVKIQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLESAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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