Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MEQPTSSTNGEKRKSPCESNNNKNDEMQETPNRDLAPEPSLKKMKTSEYPRVLVFCYRKVKKINSNQLENDQSRENSINPVQEEEDEDLDSAEG |
1 | 3hgfC | 0.12 | 0.11 | 3.74 | 1.33 | SPARKS-K | | KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKS------------LNKLFLEKIKKKSENIKSMEKYIKDLDEIKEQSPK |
2 | 3a7pA | 0.06 | 0.05 | 2.36 | 1.34 | Neff-PPAS | | -NIVSHDDALLNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTEKETEAM------ |
3 | 5jcss | 0.09 | 0.09 | 3.20 | 0.86 | SPARKS-K | | YIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLK--------HYVPSYLSAQVHDILLLSDE-EPIEESLAAVIPISHL |
4 | 5g52B | 0.10 | 0.05 | 1.98 | 0.27 | FFAS-3D | | MDNPNPGPDGEGEVELEKDSNVVTTQRDPSTSIPAPVSVKWSRWTSNDVVD------------------------------------------- |
5 | 5v7qR | 0.06 | 0.02 | 0.94 | 0.23 | HHpred | | ---------------------------AKALAKVAVTGEVLGH---TKGPKIRIHKFKNKTGYH------------------------------ |
6 | 6etxG | 0.12 | 0.12 | 4.16 | 0.97 | MUSTER | | PEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDR |
7 | 5l20A | 0.11 | 0.05 | 1.91 | 0.31 | CNFpred | | -------------------------------------------------ERIIIFMCTTKATLFELAYENGKSVHKTLKNYTDPAYTTAEGITS |
8 | 3rlhA | 0.05 | 0.05 | 2.40 | 0.48 | HHsearch-2 | | TYHGIGRNKKYENFNSFDLKTGSLYAGKKLAKNLL---QHYWNNGNGGRAYIVLSIPHYFKDQLTKDGHDKVGHSDDIGDVGAYKKAGITGWDG |
9 | 3hgfC | 0.14 | 0.12 | 4.00 | 1.22 | Neff-PPAS | | KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKS------------LNKLFLEKI---KKKSENMIKSMEKYIKDLDEIKE |
10 | 2lrcA | 0.11 | 0.07 | 2.66 | 0.22 | HHsearch | | -----------------------------MKTRYSAEAPARDELDRLAGPTLVEFGTDWCQAAQPAEVFSDYP---EVGHLKVEDGPGRRLGR- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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