Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MERTLQSVVGRRRGSSNRGRGKNSLISTPSYALHPPPRFRYPRWEFVRQTEYSMTACVRKGKLVLTYQYAIWKRVWTIETGFTDPSLFMTPAGTHTTEEIGHLDLFWLRYCSCPHEMPPWLDFLRGTLNLRISCRRALQASVLTSTPRHSLQRLAALQLCTNACLCWYPLGRINDTTPLWLNFSSGKEPTIQQLSGHP |
1 | 2esnC2 | 0.14 | 0.13 | 4.29 | 0.70 | SPARKS-K | | ------------PFVPGQSQRTFVFAATDYTAFALLPPLSAPGVRLRLAERKLSVEALASGRIDFALGYIQAHDWFADRY------VVVARRGAPTLEGYLAER--HAVVTPWNEDSGVIDRLLARQLPTVLAALFLAGSTDFL----LTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQHRDAIGQLKGLD |
2 | 2qvsB1 | 0.12 | 0.09 | 3.03 | 0.42 | FFAS-3D | | ----------RRVSVCAETFNPDEEEEDVVHACKDILLFKNLDQEQLSQVDAMFEKIVKTDEHVIDNFYVIERSVGQYDNRFGELALMYNTPRAATIIATSEGSLWGLDR-------VTFRRIIVKNNAKKRKMFESFIEPLFKSLEMSERMKIVDV----------------------------------------- |
3 | 3myxA | 0.17 | 0.12 | 3.98 | 0.26 | HHpred | | -----HDPFGRRTAFVDEQGIAAGIVEFGT-A-LSVE--AYPY------TEL-----VHRGSVTLTSG----TDSVTLSTG----ESAVIGRGTVRIDAQPESLWAFCASTQASPDKSG-ITALDRLALL-----------TPSSPPDPS------I-I-SPLPQCRSNNLFEDTASTLRIGVTPYEIS--------- |
4 | 2esnC | 0.18 | 0.17 | 5.60 | 0.59 | MUSTER | | LGEGLEEW---RPFVPGQSQRTFVFAATDYTAFAPPNRLSAPGVRLVNAERKLSVEALASGRIDFALGYDRLPEGIQAHDWFADRYVVVARRGAPTLEGYLAER--HAVVTPWNEDSGVIDRLLARSLRREVAVQVLAALFLAGSTD--TAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQHRDAIGQLKGLD |
5 | 4ekuA | 0.07 | 0.04 | 1.44 | 0.51 | CNFpred | | --------------------------------------------------------------YGLRLKHMKSDEIHWLHP---QMTVGEVQDKYECLHVEAEWRYDLQIRYLPEDFMESLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRF------------------------------------ |
6 | 2pffB | 0.16 | 0.15 | 4.89 | 0.48 | HHsearch-2 | | FDKKSNSALFRAVGEGNAQQGNTDDYFEELRDL-------YQTYHVLVGDLIKFSAETLDAEKVFTQGLNI--LEWLENPNTPDKDYLLSAKLLFTPGELRSLQVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSIL----EDSLENNEGVPSLSISNLTQEQQDYVNKTNSHLPAGKQVEISP |
7 | 2esnC2 | 0.14 | 0.13 | 4.46 | 0.77 | Neff-PPAS | | --------------VPGQSQRTFVFAATDYTAFALLPPLSAPRLRLVNAERKLSVEALASGRIDFALGYDRLPEGIQAHDWFADRYVVVARRGAPTLEGYLAER--HAVVTPWNEDSGVIDRLLARSVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQHRDAHAWMIGQL |
8 | 4ce4c2 | 0.13 | 0.09 | 3.17 | 0.33 | HHsearch | | MGCVIERAFKDEYVV-SLVRAEVPVIAGAFCYVVLDKRLWMPTKENLHSFTKDARALIYKDLPFETLEVERIVKLHRFG-DFIDV-----SEGPLRTSICFQYEVSAVHNLQ-T----------QSSLVRRFQGLVHLRA----HFTIWKLLERSRKMVTEDKT---------------------------------- |
9 | 1utbB | 0.12 | 0.12 | 4.08 | 0.80 | SP3 | | LQTALTTR---DSFDPFASTRTFNLAMTDIGEMYPPEALAAPHIQILRPNAGNLSEDMESGALALGLLPELQTG-FFQRRLFRHRYVCMFRKDPMSLKQFSELEHVGVVALNTGHGE--VDGLLERAIKRRMRLVIAIGPILHSTVPERFAVRCEV-----PFGLTTSPHPAKLPDIAINLFWHAKYNRDFVELFSEA |
10 | 1texA | 0.06 | 0.05 | 2.24 | 0.62 | PROSPECTOR2 | | PQEFFQYLPNTSMSPQPREWFADEDQSILRLLDPLIEGKPDLAPATIWRDYIQTVGRTPNGVWGGKLMWNQTPLLVQRAKDLPD------RSGSGLLSAIRDVVFWRAVQTRVWRRAEYHAGAIAHVITMLRAQEEGWRAWFTEENVEPVVGTVLEA------------LGQDPRLAEWVERYRDQRD------GLPL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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