Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KKRSFLLVEVLVSFTLFLLIFCALGFWQRHLLISSRRNERLYKSFLQENIAYKKLRELFRFTSQFESLSSDTLCSVIFDRGVYSDPELAGEVAGFLCYNTHRKQLELSIRSLKNQHKMETFVLLDHVSRVCCIPFSRDAENNDLPNRVTLHIYRNSPNLCQERLLVYQFNLGK |
1 | 3cfiB | 0.13 | 0.10 | 3.60 | 1.62 | SPARKS-K | | -------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNYLLDSDNKGIMFARLGWHNPQQPRGEVTKVGYRIKDERLERVWWRYPDTQEGVVTPLLSDVEELNVRFYINEWSNETLPAAISVELTLK-----DYGKIARTYLTPE |
2 | 3cfiB | 0.11 | 0.08 | 2.95 | 1.38 | FFAS-3D | | -----------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGDNKGIMFARLGWHNPQFPRGEVTKVGYRIKDERLERVWWRYPDTQEGVVTPLLSDVEELNVRFYDGKSNELTLPAAISVELTLKDYG-----KIARTYLTPE |
3 | 3cfiB | 0.14 | 0.11 | 3.75 | 1.35 | HHpred | | --------------------------------LSQERTARLNELQRALVMMDSDFRQIALRQTRTNLLLDSDNKGIMFARLGWHNPQFPRGEVTKVGYRIKDERLERVWRYPDTPAEGVVTPLLSDVEELNVRFYDGKWSNLTLPAAISVELTLKDYG-----KIARTYLTPE |
4 | 3cfiB | 0.12 | 0.10 | 3.45 | 1.43 | MUSTER | | -------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNYLLDSDNKGIMFARLGWHNPQFPRGEVTKVGYRIKDERLERVWWRYPDTQEGVVTPLLSDVEELNVRFYDGKQNELTLPAAISVELTLK-----DYGKIARTYLTPE |
5 | 2retB | 0.10 | 0.08 | 2.80 | 0.84 | CNFpred | | ---------------------------------SQERTARLNELQRALVMMDSDFRQIALRQTKLLHWADNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTQEGVVTPLLSDVEELNVRFYDG-SNELTLPAAISVELTLKD-----YGKIARTYLTPE |
6 | 3cfiB | 0.14 | 0.11 | 3.76 | 2.04 | HHsearch-2 | | -------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTKLLWDSDNKGIMFARLGWHNPQFPRGEVTKVGYRIKDERLERVWRYPDTPAEGVVTPLLSDVEELNVRFYDGQWSNLTLPAAISVELTLKDYG-----KIARTYLTPE |
7 | 3cfiB | 0.11 | 0.08 | 2.95 | 1.44 | Neff-PPAS | | -----------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGDNKGIMFARLGWHNPQQQFGEVTKVGYRIKDERLERVWWRYPDTPEGVVTPLLSDVEELNVRFYDGKSNELTLPAAISVELTLK-----DYGKIARTYLTPE |
8 | 3cfiB | 0.14 | 0.11 | 3.75 | 2.32 | HHsearch | | -------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTKLLWDSDNKGIMFARLGWHNPQFPRGEVTKVGYRIKDERLERVWRYPDTPQEGVVTPLLSDVEELNVRFYDGKWSNLTLPAAISVELTLKDYG-----KIARTYLTP- |
9 | 2retB | 0.13 | 0.10 | 3.59 | 1.07 | PROSPECTOR2 | | E-------------------------------LSQERTARLNELQRALVD--SDFRQIALLHWADYLLDSDNKGIFARLGWHNPQQQFPRGEVTKVGYRIKDERLERWWRYPDTPQEGVVTPLLSDVEELNVRFYDGKQNELTLPAAISVELTLKDY-----GKIARTYLTPK |
10 | 3cfiB | 0.13 | 0.10 | 3.59 | 0.84 | SAM | | --------------------------------LSQERTARLNELQRALVMMDSDFRQIALRQTRTKLLHWSDNKGIMFARLGWHNPQQPRGEVTKVGYRIKDERLERVWRYPDTPQEGVVTPLLSDVEELNVRFYDGKWNELTLPAAISVELTLKDYG-----KIARTYLTP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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