Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | QTHSPQILAFARQRQLIAQLATQAGRIGKRAQTPVAATVRQLDTVSEQIHAMTEDACARLLNVSTGLIGILQLLEVWSDRAWECRCLHCLLVPLKLELDGALNDVQGML |
1 | 6ff6A1 | 0.11 | 0.10 | 3.65 | 0.81 | SPARKS-K | | ----FYQTFFDEADELLADMEQHLLDLVPESPD--AEQLNAIFRAAHSIKGGAGTFFTMLQYAVELMENMLDFARRGEMQLN--TDIINLFLELKDLMQRMLDYYKNKP |
2 | 2l7nA | 0.14 | 0.14 | 4.67 | 0.89 | FFAS-3D | | -----TQDLGNSTKAVSSAIAKLLGEIAQGNENYAGIAARDVAGGLRSLAQAARGVAALLDTASDVLDKASSLIEEAKKGHPGDPESQQRLAQVAKAVTQALNRCVSCL |
3 | 4biuA | 0.14 | 0.12 | 4.06 | 0.23 | HHpred | | -------KPARKLKNAADEVAQGNLRQHPEAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGES---K--------ELERIETEAQRLDSMI |
4 | 3i9yA | 0.12 | 0.12 | 4.21 | 0.64 | MUSTER | | GGESFDSKLLDALESNVQNVINNLAELGVWLAKEIDTRVEEMRLLSEELEQLTLDLTERLHELHLLAFKMLNQIEEAR-TLTNVDRIQQIQTAFENNLKIMKRRVLAVE |
5 | 4wvmB | 0.10 | 0.09 | 3.40 | 0.55 | CNFpred | | ------RNTLEAIVQVQMRCNDALDDPTVNLFTEVQKKLSDFQKICDDHMSKLQATIAKKLFAI--ESALLNLFEENLQSPFNIESLNMWMEFEEREINVLRSCMDILT |
6 | 1vt4I3 | 0.14 | 0.14 | 4.67 | 0.77 | HHsearch-2 | | DDLIPPYLTLFRMVLDFRFLEQKIRHDST-AWNASGSILNTLQQLKFYK----PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAIFEEAHKQVQRGG |
7 | 6ff6A1 | 0.07 | 0.06 | 2.63 | 0.76 | Neff-PPAS | | -----YQTFFDEADELLADMEQHLLDLVPESPD--AEQLNAIFRAAHSIKGGAGTFG--FTMLQYAVELMENMLDFARRGEMQ--LNTDIINLFLELKDLMQRMLDYYK |
8 | 3craA2 | 0.10 | 0.09 | 3.40 | 0.50 | HHsearch | | DDIPRSLPALMRAQKIQKRCAN-VGFDWTTLGPVVDKVYEEIDEVMYEARQDQAKLEEEMGDLLFATVNLARHL---G---TKEIALQKANEKFERRFREVERIVAAR- |
9 | 2pmsC | 0.13 | 0.13 | 4.45 | 0.72 | SP3 | | --GSHMDAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAV |
10 | 2pmsC | 0.10 | 0.10 | 3.69 | 0.62 | PROSPECTOR2 | | GSHMDAEEVAAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSD----KIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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