Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | FNHCNLPPWVIASRHFNDNPHNLEIQGVRGANRFLFDKLDTISSAEERAHIFNDYMSVKFQLHQWENQSTATARKSIKNSYLRFLRGWMMDSNSIEGAVLKGWVESRMGLPPTFHKLRIPGIHSEAYMVFAMDRTKGSARTNAINSQLDLLYEYCQYELAQRHPNERWLTLYRGTFDASEHDVLETISKREQIVRLNNLSSFTSVEERAWEFGFTVWEVRVPLTKLFFYNDLLPNSIMKGEGEYMVIGGEYHVRV |
1 | 4elnA | 0.11 | 0.09 | 3.13 | 0.90 | SPARKS-K | | ------------SPRPLSPLVELNTSDLIKQKKQLWQRVQHDRSTPEERKQFKTALITL---------WGEQYRPERQQRWNGMMQRMAKYMATEDLVALQAWT-------------------TDDYEVV----QDVLEKEARPTAHGLAFAKCIISALHSLPEESYQGTVFTGEDQ--LPDWVSERYQERSITTDRRFFAASETKNA--SWQGMAVEWESNSTTGKRISMFSER---PNEQEVLFPGTRFQVTR |
2 | 1ojqA | 0.16 | 0.09 | 3.14 | 0.67 | FFAS-3D | | ------------------------------------------------------------------------------------------NFTDLVEA--TKWGNSLI------KSAKYSSKDKMAIYNYTKNSSP---INTPLRSNIQEQVRQLDSTISK-SVTPDSVYVYRLLNTREDLHMLQQTNNGQYIYRENGYSSTQLVSGAALAGRPIELKLELPKGTKAAYIDSKELTAYPGQQEVLLPGTEYAVG- |
3 | 3buzA2 | 0.11 | 0.07 | 2.40 | 0.69 | HHpred | | ----------------------------------------------------------------------------------------DFKD-DVSKG--DLWGKENYSDLTPNELADVNDYMRGGYTNYLISNGPLNNPNPELDSKVNNIENA----LKL-TPIPSNLIVYRRSGPQEFGSPIDEK-WEGKVITYPNFISTSIGSVNMSAFAKIILRINIPDSPGAYLSAI-PG--YAGEYEVLLNGSKFKIN- |
4 | 4elnA | 0.13 | 0.10 | 3.56 | 0.67 | MUSTER | | ----------------SPRPSPLELNTLIKQKKQLWQRVQHDGAQPEERKQFKTALITL--WGEQYRPERQQRWNGMMQRMAQMKWNHPELKYTEDLVALQAWTT-------------------DDYEVV-----DVLEKEARPTAHGLAFAKCIISALHSLPEEYSYGTVFTGE-DQLPDWVSERYQER-SITTDRRFFAASETKNASWQGMAVEWESNSTTGKRI---SMFSER--PNEQEVLFPPGRFQVTR |
5 | 1og4A | 0.12 | 0.07 | 2.65 | 0.69 | CNFpred | | ----------------------------EEKAPLLLQEDFNNAKLKVAWEEAKKRWNNIK-----PSRSYPKGF------------------NDFHGTALVAYTGSI----------------AVDFNRAVREFK----------FHYKAFHYYLTRALQLLSN-GDCHSVYRGTKTRFHYTGA-------GSVRFGQFTSSSLSKKVAQSQ-GTLFIIKTCL--GVYIKEFS---FRPDQEAVLIPYEVYQKVR |
6 | 3buzA2 | 0.11 | 0.07 | 2.42 | 0.75 | HHsearch-2 | | --------------------------------------------------------------------------------------SLDFKDD-VSK--GDLWGKENYSDLTPNELADVNDYMRGGYTNYLISNGPLNNPNPELDSKVNNIEN----ALKL-TPIPSNLIVYRRSGPQEFGSPIDEK-WEGKVITYPNFISTSIGSVNMSAFAKIILRINIPKDPGAYLSA-IPG--YAGEYEVLLNHGKFKINK |
7 | 4elnA | 0.13 | 0.11 | 3.67 | 0.77 | Neff-PPAS | | -------------------LVELNTSDLIKQKKQLWQRVQHDRSTPEERKQFKTALITLWGEQYRPERQQRWNGMMQRMAQMKWNHPELKYMATEDLVALQAWTTDDYEVVQDVLEKEARP------------TAHGLAFAKCIISALHSLPEEYSY----------QGTVFTGEDQ--LPDWVSERYQERSITTDRRFFAASETKNASWQGMAVEWESNSTTGKRI--SMFSER---PNEQEVLFPPGRFQVTR |
8 | 3buzA2 | 0.12 | 0.07 | 2.52 | 1.30 | HHsearch | | ------------------------------------------------------------SL--------------------------DFKD-DVS--KGDLWGKENYSDLTPNELADVNDYMRGGYTNYLISNGPLNNPNPELDSKVNNIEN----ALKL-TPIPSNLIVYRRSGPQEFGSPIDEK-WEGKVITYPNFISTSIGSVNMSAFAKIILRINIPKDPGAYLSAI-PG--YAGEYEVLLNHGKFKIN- |
9 | 4xsgB | 0.12 | 0.07 | 2.64 | 0.88 | SP3 | | ------------------------------------------------------------------------KYKLCTN--KEEADAWGNKWSKEEKSAIRDYTKN-----------------ARPYNEFLRMHAGKLDSDPTMKKKIESLDKALNRK---EAKVNDNIKVYRGDDIFGKEYDNSIIKNGKKTTTEFGYISTSILIDAGYAKTPVMTEFKVGSTHGAYMNSD-DLTAYPGQYELLLPRNVYKIEK |
10 | 3u0jB | 0.10 | 0.08 | 2.91 | 0.80 | PROSPECTOR2 | | ERHYSTGQDRHDFYRFAARLHV------------------DAQCFGLSIDDLMDK------FSDKHFRAEHPEYRDVYPEECSAIYMHTAQDGTPLYREVNNYLRL----------QHENSGREAEIDN----------HDEKLSPHIKMLSSALNRLMDVA---AFRGTVYRGIRGDLDTARLYHLFDTGGRYVEPAFMSTTRIKDSAQVFENIAFQISLK-----RGADISGSSQAPSEEEIMIEEGKHLFVI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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