Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | AASGTTLVVYKAVFAALGVLMVGTLVYTCITDGSPFRTELLTPWMVATLVDFYVNVVAISTWVVYKEVNWISSAFWLVMLFCFGSAATCAYIVNKLFEITPSGPSQDPLDLLLLRQGNPPERKCYFVKIGRIVFSILGILMAALVTYTVITDGLPFRKDLLTPWMAATLVDFYINVFAISVWVVHKESTWISSVIWICLLICFGSITTCGYIVVQLLRVSYHDPIDHVLLNSHSKS |
1 | 5y78A | 0.08 | 0.08 | 2.99 | 0.84 | SPARKS-K | | LVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYP---------WVLSTIQLGVGALYCTFLWVRTKPNHTLGHAATCMSFSLVAISFTHVVKSAEPVFGEFFHPLTGVALSAATELTFTW--------TGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIII |
2 | 4or2A | 0.10 | 0.08 | 3.18 | 0.99 | FFAS-3D | | EWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLMCYSALVTKTNRIARIL--------------------ARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPYLICNTSNLGVVAPLGYNGLLIMSCTYYAFNEAKYIAFTMYTTCIIWLAAVSLSVTVALGCMFT----PKMYIIIAKPE-- |
3 | 5xtcl | 0.15 | 0.10 | 3.40 | 0.27 | HHpred | | ---------THAFFKAMLFMCSGSIIHNLN-NEQDIRKMKTMPLTSTSLTIGSAGMPFLT-GFYSKDHIIETANAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTL-----TN----INENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQTT--IPLYAVTFLGLLTALD----------------------------------------------------------- |
4 | 3mktA | 0.10 | 0.10 | 3.57 | 0.77 | MUSTER | | DVEEAMATKTVGYMHAVIFAVPAYLLFQALR-SFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVK-------VFETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVA--APLGSTVVAAHQVALNFSSLVFMFPMSIRVGHQDTKGAAIAANVGLMTGLA-TACITALLTVLFR----EQIALLYTENQVVV |
5 | 2yevA | 0.12 | 0.11 | 4.01 | 1.20 | CNFpred | | YNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLA-GWTFYYP-SGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVW----------SVFAASVLNLFSLAGLTAATLLVLLERKGLSWFNPAGDPVLFQQFFWFYSHPTVYVMLLP-----YLGILAEVASTFAR-GYRQMVWAQMGIVVLGTMVWAHHMFTVGESTL |
6 | 2pffB | 0.17 | 0.16 | 5.16 | 0.68 | HHsearch-2 | | FAATPAELVGKFLPSKVGQDQVLNLCLTENDTTLVKTKELIK---------NYITARIMAKRPFDKKSNSALVAIFDYFEELRDLYQTYHVLVGDLIKFSAETLSELTLDAVFTQGLNIPTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFPGESYLSQGLVTA--VA----IAETDSWESFFVSVKAITVLFFIGVRCYEAYPPSILED--SLENNEGVPSPLSISNLTQEQ |
7 | 6h7dA2 | 0.08 | 0.08 | 2.99 | 0.92 | Neff-PPAS | | ---ESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLFGDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTS------------GTGTLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICP--LEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFASMVAIMTVFIYFLLPETKGVPIEEMGRVWKQHWFWKK |
8 | 5v4sA3 | 0.10 | 0.04 | 1.43 | 0.26 | HHsearch | | ------------------------------------------------------------------TPGILRLVLFAFWATLVAHWCAVGWLYVDDLLQTGWSEYIIALYWTVATIATVGYGDITPTDSQRIFVMILGAGVYATVIGNIAGSLDLAKAAQ---------------------------------------------------------------------------- |
9 | 6idpA1 | 0.13 | 0.11 | 3.96 | 0.84 | SP3 | | --QTSTSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAQLGFTMPIQMVIIGIQVGLGIATTAVISRAIGEYAKQLGGLVIVIGGIGVALIALVLYLLRQ---------PLLGLLG--APETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGN------TLLPGTLMMVTSVLNLILDPIFIFTFDLG-IDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDL---------- |
10 | 5y78A | 0.05 | 0.05 | 2.31 | 0.89 | PROSPECTOR2 | | SPTLVHTLKVGWVLSTIQLGVGALYCTFLWVLGLRTKPNVSKKLIKIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSAPIVSGVALSAATELTFTWTGFITAMTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYDNVSPVSFSIGNTIKRVIIIAIIGTMLYSLAKA---------------KLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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