Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | IYRPCYLDDYKCISDHLAANSKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITRNHDQCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGC |
1 | 3e8wA | 0.10 | 0.09 | 3.44 | 1.39 | SPARKS-K | | PVEKCNLEDSACMTSAFQQALAGLPDHGVEVDVLDLDDFAFDLSG--LQFTLKEGKLKGLKGAVIDNVKWDLKKKN--IEVDFHDATVKGHYTAGGRILLPITGDGQMKLKLKNIHIHLVVSYEMEKD---AEGVDHVIFKKDNAQFGLTNLSDTMLTFLNQNWEEFGKPVMEAAAKKIFKNIKHFLAKVPIAEIA |
2 | 2rckA | 0.12 | 0.12 | 4.14 | 1.02 | FFAS-3D | | -TEPCDVSDIECISKATQVFYQGIPEYNKKLDPITIPSLEKSIEKINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKVN-FTAEG-KLVIELPKSSKTYTGEVTIEASAEGAAYSYSVKTDDKYEAGPETVSCEIFGEP-TLSVSSTDSDFKKIFTEYGKQLTEGRKQTACRIVETVYAVSVHNIRAAA-- |
3 | 2rckA | 0.14 | 0.13 | 4.34 | 0.69 | HHpred | | STEPCDVSDIECISKATQNTYQGIPEYIKKLDPITIPSLEKSIEKINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKV-NFTAEGK-LVI-ELPKSKTYTGEVTIEAS-AEGGAAYSDKGVEHYEAGP-ETVSCIF-GEPTLSVDSDFKKIFTEYGKQ-------LTEGRKQTACRIVETVYAV------- |
4 | 3a1zA | 0.14 | 0.14 | 4.67 | 1.18 | MUSTER | | --KPCKLGDMQCLSSATEQFLESKPQYD-IWPPLVVTSLDVIAPSAGIVIRFKNLNITGLKNQQISDFQMDTKAKTVLLKTKA-DLHIVG-DIVIELTEQSKSFTGLYTADTNIGAVRYGYNLKNDDNFEV-QPETFTCESIGEPKITLSSDLSSALEKDSGPLKTLRQAAICKIAEACYISVVHNIRAS---AKI |
5 | 2rckA | 0.12 | 0.11 | 3.96 | 1.41 | CNFpred | | STEPCDVSDIECISKATQVFLDNT--NIKKLDPITIPSLEKSIEKINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKVN-FTAEG-KLVIELPKSSKTYTGEVTIE---ASAEGGAAYS-VEHYEAGETVSCEIFG--EPTLSVS---STLEDALKSDFKKIFTEYGKQLTEGRKQTACRIVETVYAVSVH |
6 | 3e8wA | 0.09 | 0.08 | 3.13 | 1.14 | HHsearch-2 | | PVEKCNLEDSACMTSAFQQAVAGLPDHGEVMDVLDLDDFAFDLS--GLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHL-DATVKGHYTAGGR-------ILILPITGDGQMKLIHLVVEGVDHVIFKKYTVTFDVK-DNAQFGLTNGNKELSDTMLTF---LNQNWKQVSEEFGKPVMEAAAKKIFKKVPI |
7 | 2rckA | 0.13 | 0.13 | 4.57 | 1.66 | Neff-PPAS | | -TEPCDVSDIECISKATQVFLDNTYQNIKKLDPITIPSLEKSIEKINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKV-NFTAEGKLVIELPKSSKTYTGEVTIEASAEGGAAYSYSVKTDDEHYEAGPETVSCEIFGEPTLSVSSDFKKIFTEYGKQLTEGRKQTACRIVETVYAVSVHNIRAAARILPK |
8 | 3e8wA | 0.09 | 0.09 | 3.27 | 1.34 | HHsearch | | PVEKCNLEDSACMTSAFQQAVAGLPDHGEVMDVLDLDDFAFDLS--GLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHL-DATVKGHYTAGGR-------ILILPITGDGQMKLIHLVVEKAEHVIFKKYTVTFDVKD-NAQFGLTNGNKELSDTMLTF---LNQNWKQVSEEFGKPVMEAAAKKIFIKVP- |
9 | 2rckA | 0.14 | 0.13 | 4.55 | 0.89 | PROSPECTOR2 | | SKLNCDVSDIECISKFLDNTYQGIPEYNKKLDPITIPSLEKSIEKINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKVNVIELPKSSKTYT-------GEVTIEASAEGGAAYSYSVKTDDKGVEEAGPETVSCEIFGEPTLSVSSTFKKIFTEYGKQLTEGRKQTACRIVETVYAVSVHNIRAAARILPK |
10 | 2rckA | 0.13 | 0.11 | 3.71 | 0.32 | SAM | | -TEPCDVSDIECISKATQVFLDNTYQGIKKLDPITIPSLEKSIEKINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNF--------------KV-----------NFTAEGK-LVIEEAGGAAYSYSVKTDKGVEHYEAGPETVSCIFGEPTLSVDALKKKIFTEYGKQLTEGRKQTACRIVETVYA-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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