>PF07272 (145 residues) MQWLRHTTFEVQRFDFCPISLRELATPSFTALVGTDSPQYFSIELSHSHPLYSQLTNLLS QPCRVHVRLIRRFALYSTLSSICEYDCALLLSPHAIIPLPTSNQRSYLVVHWDGGSQSIA AKRSRQLDTVIDFEHDYKSWRFDSS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | MQWLRHTTFEVQRFDFCPISLRELATPSFTALVGTDSPQYFSIELSHSHPLYSQLTNLLSQPCRVHVRLIRRFALYSTLSSICEYDCALLLSPHAIIPLPTSNQRSYLVVHWDGGSQSIAAKRSRQLDTVIDFEHDYKSWRFDSS | |||||||||||||||||||
1 | 3jb6B2 | 0.24 | 0.07 | 2.14 | 0.10 | HHWb | --------------------------------------------------------------------------------------------------------YEGCLITWTGIYGEVTSKRDLGLDVGDDYLKEYKKLLFYGV | |||||||||||||
2 | 4nyqA | 0.11 | 0.10 | 3.52 | 0.61 | SPARKS-K | PRALVGKWYLRTTSP--DI-FKQVSNITEFYSAHGN-DYYGTVTDYSPEYG--------LEAHRVNLTVSGRTLMNDTHEYDSKYEILAVDKDYFIFYGPPAAPSGLALIHYRQSCPKDVIKRVKKANVCLDYKYFGNDTSVPCH | |||||||||||||
3 | 1iz1B2 | 0.08 | 0.06 | 2.42 | 0.39 | FFAS-3D | -PGIEIVNIAQEDLFGKTCKLADLRAVELTLFPRGGRPSFIEPRIARVVEDATAALALTMAG--AASSIVPASVAAIRWPDI------------AFARIVGTRVKVPISCIFRKEKQPPILAR---------------------- | |||||||||||||
4 | 3jb6B2 | 0.24 | 0.07 | 2.14 | 0.10 | HHpred | --------------------------------------------------------------------------------------------------------YEGCLITWTGIYGEVTSKRDLGLDVGDDYLKEYKKLLFYGV | |||||||||||||
5 | 4nyqA | 0.11 | 0.10 | 3.72 | 0.74 | MUSTER | PRALVGKWYLRTTS---PDIFKQVSNITEFYSAHGN-DYYGTVTD--YSPEYGLE----AHRVNLTVS-TLKFYMNDTHEYDSKYEILAVDKDYFIFYGPPAAPSGLALIHYQSCPKEDVIKRVKKANVCLDYKYFGNDTSVPCH | |||||||||||||
6 | 4q8gA | 0.18 | 0.10 | 3.15 | 0.55 | CNFpred | ----------------------------ECTVKN--LPSVLSLELSLLDTEFSNIRSSKNLTSEFYGSIIKNKAVLRS-SHIFKYELNGY-----VAKITDNNNETRLVTYVKKY------------------------------ | |||||||||||||
7 | 3jb6B2 | 0.24 | 0.07 | 2.14 | 0.42 | HHsearch-2 | --------------------------------------------------------------------------------------------------------YEGCLITWTGIYGEVTSKRDLGLDVGDDYLKEYKKLLFYGV | |||||||||||||
8 | 4nyqA | 0.09 | 0.08 | 3.17 | 0.69 | Neff-PPAS | --TPRALVGKWYLRTTSPDIFKQVSNITEFYSAHGNDYGTVTDYSPEYGLEAHRVNLTVSGR-------TLKFYMNDTHEYDSKYEILAVDKDYFIFYGPPAAPSGLALIHYQSCPKEDVIKRVKKANVCLDYKYFGNDTSVPCH | |||||||||||||
9 | 4mfjA2 | 0.11 | 0.04 | 1.48 | 0.42 | HHsearch | --------YRLGRLQFSLATG-------------KDGTPHLGLHVPEWGPLLPKAYDESHRARPF-------FDRFPEHGA---------------------------------------------------------------- | |||||||||||||
10 | 1p6tA | 0.12 | 0.12 | 4.12 | 0.57 | SP3 | LSEQKEIAMQVSGMT-CAIGLKR--MPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVTEKAEFDIEGMTCAACANRIERLNKIEGVANAPVNFALETVTVEYNPKEASKEAVDKLGYKLKLKGEQDSIEGR---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |