Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MMQSIPSFVKDTSDIEEHALPTAQVLPAQSTRCSKSETLCFSKEQSHCSEDGWIAEWDLYSFCVFESVDYLRSYRRLNSAMKKGTEVFQSESQRKPQVSPGDVENYKDKDTEEPDQPFPSLLREKGLDLATCDGGDCPDQDPVSDNSRHLG |
1 | 6em5l | 0.07 | 0.07 | 2.72 | 0.96 | SPARKS-K | | VFEKLAGYIGRNISFLVDNKELPHVF-----RLQKDRVYYVPVARPNLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKY------KIWIKPNGEMPFLYGNHVLKAHVGKMSDDIPEHAVFAMNDVPLSAKSTSESRNMQPTGIVAFRQA |
2 | 6bllC | 0.13 | 0.09 | 3.01 | 0.34 | FFAS-3D | | MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDK-------SGAAVC-----------------------EFFLKAACGKGGMCPFRHISGEKTVLCKKGDQCEFLHEYDMTKMPECYFYSKFG-----ECSNKECP------------- |
3 | 4fweA | 0.21 | 0.14 | 4.43 | 0.34 | HHpred | | ------------------------YRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGHF-CNECFDHYYRS---HKDGYDKYTSNGKTEPSPLPYWVECRKWRQLTKEIQLTPQIAKTY-----RCGMK---------------- |
4 | 6d4hA | 0.11 | 0.11 | 3.82 | 0.92 | MUSTER | | TTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEY------LYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCADPDCPATAPNKNSTKPLD |
5 | 1jqdA | 0.15 | 0.05 | 1.79 | 0.57 | CNFpred | | ------------------------------------------------------TNAKMLIIVVSGSSGWDKLWKKYGSRFPQDCQYITSDD-------------------------LTQMLDNLGLKYECYD------------------ |
6 | 2pffB | 0.19 | 0.19 | 6.01 | 0.57 | HHsearch-2 | | LYETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQHYVVTGFTPGELRSYLKWESFFVSVRKAITVLFFIGVRNEGVPSPMLVNGAKNLVVSGPPQSLYGLLRKAKAPSGKFSNRFIPVYDTFDGSLRVLS |
7 | 1hmcA | 0.18 | 0.16 | 5.18 | 1.01 | Neff-PPAS | | ----------SHMIGSGH-LQSLQRLIDSQMETSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIME--DTMRFRDNTPNAIA--IVQLQELSLRLKSCFTKDYEEHDKACVRTFYEPLQLLEKVKNVNLLDKDWNNCNNSFAECSSQGH-- |
8 | 2y35A3 | 0.16 | 0.09 | 2.85 | 0.69 | HHsearch | | -----------------------------------------------------------VFFPGFPTMQHLPFDFEL---RNDRVKVFEQVSRNQNIVLK--PRKRQL----ED--TLTAVAS-QYLGKVIATRDQRVDSEGITLNDRRF- |
9 | 5y6pC1 | 0.11 | 0.11 | 3.80 | 0.61 | SP3 | | ADLPPPGIPSGQDPLDNAPLRHYVPRPVETPRTWEGETNTIGAGDIEPVTKEEVEESRKVPVDAASTGAFVEYARMMKEERAQALADQARRNSAP---TSGRPTCGETEGTEFVSNARPILVDGKVVEYWGVPNGPVPRLFGGPG------ |
10 | 5y6pC1 | 0.12 | 0.11 | 3.99 | 0.64 | PROSPECTOR2 | | QADLPPPGIPSGQDPLDNAPLRHYVPRPVEPRTWEGETNTIGAGDIEPVTKEEVEESRKVPVDAASTGAFVEYARMMKEERAQALADQARRNSAPTSGRPT---CGETEGTEFVSNARPILVDGVK-----VVEYWGVPNGPVPRLFGGPG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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