Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | CGAPVQGQTLPAGVDVEKETVITGRVLAADGQPVGGAFVRLLDGTGEFTAEVVASGTGDFRFFAAPGTWTVRALSSTGNGDTTVTPEGNGVHNVDITV |
1 | 3e8vA | 0.22 | 0.17 | 5.47 | 1.39 | SPARKS-K | | -------------------AKGSVLVTDAEGQPVADATVEFKVYNYYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFG--KDNELKITL |
2 | 3e8vA | 0.19 | 0.15 | 4.92 | 1.27 | FFAS-3D | | --------------------KGSVLVTDAEGQPVADATVEFKVYNYATVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITLD- |
3 | 2nsmA2 | 0.25 | 0.18 | 5.70 | 1.21 | HHpred | | --------------------GIKGMVLDQNYNNLANAVISVSGIN----HDVTSGDHGDY-FRLLPGIYTVSATAPGYDETVTVTVGPAEPTLVNFHL |
4 | 3e8vA | 0.22 | 0.17 | 5.47 | 1.70 | MUSTER | | -------------------AKGSVLVTDAEGQPVADATVEFKVYNYATVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDN--ELKITL |
5 | 3e8vA | 0.19 | 0.15 | 4.94 | 1.31 | CNFpred | | -------------------AKGSVLVTDAEGQPVADATVEFKVYEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITLDK |
6 | 3e8vA | 0.22 | 0.17 | 5.47 | 0.97 | HHsearch-2 | | -------------------AKGSVLVTDAEGQPVADATVEFKVYNYYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGK--DNELKITL |
7 | 3e8vA | 0.19 | 0.15 | 4.94 | 1.78 | Neff-PPAS | | -------------------AKGSVLVTDAEGQPVADATVEFKVYNFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITLDK |
8 | 3e8vA | 0.22 | 0.17 | 5.46 | 1.21 | HHsearch | | -------------------AKGSVLVTDAEGQPVADATVEFKVYNFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKD--NELKIT- |
9 | 3e8vA | 0.19 | 0.15 | 4.94 | 0.84 | PROSPECTOR2 | | -------------------AKGSVLVTDAEGQPVADATVEFKVYNYATVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITLDK |
10 | 1uwyA2 | 0.17 | 0.13 | 4.35 | 0.81 | SAM | | ---------------------VKGQVFDQNGNPLPNVIVEVQDRK--HICPYRTNKYGEYYLLLLPGSYIINVTVPGHDHITKVIIPEKSALKKDILL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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