Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | QYKNREVSSVFVDENGKEYIVSATVDANGKVSFDTSSLPKPGNYNLSKVVDKNTNEQI |
1 | 5jvkA1 | 0.20 | 0.19 | 6.05 | 0.84 | SPARKS-K | | GEGNMRLTGKLVRYGDNL-TFSGVANAGKELVIDVTEL---GYYTLELTLADNENIIQ |
2 | 4z7aA1 | 0.15 | 0.14 | 4.62 | 0.48 | FFAS-3D | | ---DGWFQRVLTNSAGKV--VAGAYSRDRTIYTITEPLGYDTTYTWSGSAVGHDGKA- |
3 | 2yn3A3 | 0.28 | 0.26 | 7.91 | 0.69 | HHpred | | --DVTGVTVNVTH-NGVTDIYQATQGADG-WTFTPPAAWNDGNYTLSVTVVDRAGNSQ |
4 | 2k7qA2 | 0.13 | 0.12 | 4.17 | 0.95 | MUSTER | | ETDLSLLTATVVPPSGREEPCLLKRLRNGHVGIS--VPKETGEHLVHVKKN---GQHV |
5 | 2d73A | 0.09 | 0.09 | 3.24 | 0.71 | CNFpred | | -----YITIARKAKDTDDWYVGCTAGEGHTSKLVFDFLTPGKQYIATVYADAKDADWK |
6 | 5irbA2 | 0.21 | 0.19 | 6.03 | 0.64 | HHsearch-2 | | ASAGDTVSMTI---NGTL--YTTVVLANKTWSVGVSGLAQDNSFQVSVTGQDSAGNPY |
7 | 4kh9A3 | 0.16 | 0.16 | 5.19 | 0.87 | Neff-PPAS | | EYDVNDVDARLVGPKGQVISLNLTKLKSNVFEGTATLDDRGENWYLETDVQTEYGQEI |
8 | 5irbA2 | 0.21 | 0.19 | 6.02 | 1.01 | HHsearch | | ASAGDTVSMTI---NGTL--YTTVVLANKTWSVGVSGLAQDNSFQVSVTGQDSAGNP- |
9 | 4p99A4 | 0.20 | 0.19 | 6.07 | 0.91 | SP3 | | GDIAEGDTVTLEI-NG--ETYTTTVDANGEWSVDVADLAADTAFDAVVTSSDAAGNTV |
10 | 2a73A1 | 0.16 | 0.16 | 5.19 | 0.44 | PROSPECTOR2 | | QSVGRTVMVNIENPEGIPVKQDSLSSQNQPLSWDIPELVNMGQWKIRAYYENSPQQVF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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