Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | AYADAAAMVPPGNRNAEQPAIPGASVRRTKGTNSTFERKYQKVHELLATDTKLMSKIKSTARAYGIDPIHIIGALVGEHTYNVDAYDGLQSYYVKAASYAGQSFRFAYDGEDVDDFVARPQFDACKGKRDSYSLWTCREDVWESDFRGKKVGGKSFPDNRFSAVFFQPFYAGQTFGLGQVNPLTALELSDLVSSTSGIPKLDEKDAGSVYKAIMDPDLSLAFVAASIRKSIDDYRSIAGMDISGNPGITATLYNVGNSRQRAAALAAKNRGAGQPVWPEENYYGWLINDKLDDLKSLL |
1 | 4luqA2 | 0.14 | 0.10 | 3.56 | 1.07 | SPARKS-K | | IQGPFSGVGATGVNPTDLPSIAFGDQLKLLNKQLSPQDKLNQAQTLVGFPDARAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAVS------------------------------IKS----------------------------------------ANTSIGLGQVVVSTAIKY-ELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQ---QDLRKLPKTRGAFIDLRAYARDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDPG |
2 | 4luqA2 | 0.17 | 0.12 | 4.08 | 1.02 | FFAS-3D | | --AGATGVASQGVNPTDLPSIAFGDQNKDPATVTKYQDKLNQAQTLVGQPISRAKVMSAAARKYDLTPQLIGAIILAEQR-DQTRDEDAKDYQAAV----------------------------------------------------------------------SIKSANTSIGLGQVVVSTAIKYE-LFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLA---SQQDLRKLPKTRGAFPSIDLPRDNVRALASEYTSR-PWDDNLSPGWPMFVDDAYATFLD-- |
3 | 4luqA2 | 0.15 | 0.11 | 3.61 | 2.85 | HHpred | | -----------GVNPTDLPSIAFGDLKLLNYSQLSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAV-S-----I----------------------------------------------------------------KSANTSIGLGQVVVSTAIKYE-LFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQ---DLRKLPKTRGAFIDLRAYAGNPRNWPRDNVRSRPWDDNLSPGWPMFVDDAYATFLDPG |
4 | 4luqA2 | 0.15 | 0.11 | 3.72 | 3.67 | HHsearch-2 | | --AGATGVASQGVNPTDLPSIAFGDLKLLNKSNLSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAV-S-----------------------------------------------IKSA----------------------NTSIGLGQVVVSTAIKYELF-TDLL-GQPRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQ-Q--DLRKLPKTRGAFIDLRAYAGNVRALASEYT-SRPWDDNLSPGWPMFVDDAYATFLDPG |
5 | 4luqA2 | 0.15 | 0.11 | 3.72 | 5.58 | HHsearch | | --AGATGVASQGVNPTDLPSIAFGDLKLLNKSNLSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAV-S-----------------------------------------------IKSA----------------------NTSIGLGQVVVSTAIKYELF-TDLL-GQPRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQ-Q--DLRKLPKTRGAFIDLRAYAGNVRALASEYT-SRPWDDNLSPGWPMFVDDAYATFLDP- |
6 | 4luqA2 | 0.16 | 0.12 | 4.00 | 2.05 | SP3 | | --AGATGVASQGVNPTDLPSIAKDPATVTKYSNPSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQT-RDEDAKDYQAAVS----------------------------------------------------------------------IKSANTSIGLGQVVVSTAIKYE-LFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQ---DLRKLPKTRGAFIDLRAYAGNPRNWPRDNVRSRPWDDNLSPGWPMFVDDAYATFLDPG |
7 | 4luqA2 | 0.15 | 0.11 | 3.74 | 1.33 | PROSPECTOR2 | | AGATGVASQAIQGPFSDLPSIAFGDQLKLLNKDPATQDKLNQAQTLVGNPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKDYQAAV-----------------------------------------------------------------------SIKSANTSIGLGQVVVSTAIKY-ELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLAS---QQDLRKLPKTRGAFIDLRAYARDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDFP |
8 | 4luqA2 | 0.19 | 0.13 | 4.23 | 1.55 | FFAS03 | | --AGATGVASTGVNPTDLPSIAFGDQLKLLNKDPATVTKYNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKD--YQAAVSIKS---------------------------------------------------------------------ANTSIGLGQVVVSTAIKYE-LFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLA---SQQDLRKLPKTRGAFPSIDL----------RAYAGNPRNWPRDNVWPMFVDDAYATFLD-- |
9 | 4luqA2 | 0.14 | 0.07 | 2.51 | 1.63 | SAM | | ---------------------------------------------------SRAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAVI--------------------------------------------------SAN----------------------TSIGLGQVVVSTAIKYELFTDLLG-QPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQ----DLRKLPKTRGAFIDLRAT-------------SRPWDDNLSPGWPMFVDDAYATFL--- |
10 | 4luqA | 0.17 | 0.13 | 4.18 | 1.46 | HHsearch | | AAAGATGVASQGVNPTDLPSIAFGDLKLLNKDNPAYQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQ-RDQTRDEDAKDYQAAV-S-----------------------------------------------IKSA----------------------NTSIGLGQVVVSTAIK-YELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLA---SQQDLRKLPKTRGAFPSIDLPRDNVRALASEYT-SRPWDDNLSPGWPMFVDDAYATFLDP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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