>PF07153 (253 residues) SRVNATMFDDMDIPRGRFGKPPRKITNVNFWHVVVDEFTEGIVQCMEARERLGLLCTIST NEGSITSFDIHKDMWCQMVIWSAYRFFAMMDKMFSIETITNFTETDLTETGQWRIFYRTW DVRDALKMKQVGPFLPALFSFHLENWTTMLSIGINKGYDRHNTRNMFMTIQSARNVLSGA MEVARYAVVLALPVCEYRTPLGLPDDSIGNAIKTCCTQMQANRLTETGISKDSGHKINDS SEEELYYRTIHDL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | SRVNATMFDDMDIPRGRFGKPPRKITNVNFWHVVVDEFTEGIVQCMEARERLGLLCTISTNEGSITSFDIHKDMWCQMVIWSAYRFFAMMDKMFSIETITNFTETDLTETGQWRIFYRTWDVRDALKMKQVGPFLPALFSFHLENWTTMLSIGINKGYDRHNTRNMFMTIQSARNVLSGAMEVARYAVVLALPVCEYRTPLGLPDDSIGNAIKTCCTQMQANRLTETGISKDSGHKINDSSEEELYYRTIHDL | |||||||||||||||||||
1 | 4btgA | 0.11 | 0.11 | 3.83 | 0.64 | SPARKS-K | LPLQFTRTFSASMTSELLWEGKGNIDPVMYARLFFQYAQAGVNQFTEYHQSTACYITGSSNRADAVGKVPPTAILEQLRLFHHITTDFVCHVLSPL----GFILPDA---------AYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPALISQHLANAAAVVSSVLTILGRLWSPSTPKELDPNGIDQLRSNLAIAYQDMVKQRGRAEVIFSDEEWFIEAMSETTSYIGQT | |||||||||||||
2 | 2jswA | 0.12 | 0.09 | 3.07 | 0.76 | FFAS-3D | ---------GIDPFTD-------------PTVIAENELLGAAAAIEAAAKKLEQLKPRAKPKEADESLNFEEQILAKSIAAATSALVKAASAA--QRELVAQGKVGAI-------------PANALDDGQWSQGLISAARMVAAATNNLCEAA----------NAAVQGHASQEKLISSAKQVAASTAQL-LVACKVKADQDSEAMAAGNAVKRASDNLVKAAQKAAAFE----------------------- | |||||||||||||
3 | 2pffB | 0.14 | 0.12 | 4.18 | 0.31 | HHpred | ---CLTEFENCYLEGNDIHALAQNDTTLVKTKELI-------KNYI--TARIMAKRPGEGNAQLVANTDDYFEE--LRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFGLNILEWLENTPDKLLSIPISCPLIGVIQLAHYVVTAKPGELRSYLKGATGQGLVSWESFFVSVRKAITVLFFIGVRAYPNTS--LPPSILE-----------DSLENNEGVPS-----PMLSISNLTQEQQDYVNTNS- | |||||||||||||
4 | 2z6bA | 0.11 | 0.11 | 3.86 | 0.59 | MUSTER | KPNRLEGFS--D-PTGQY--PRRLGNDTNV-LNQGGEVGYDSSSNVIQDSNLDTAINPDDRPLSEIPTDDNPNMSMAEMLRRDEGLRLKVYWDTEGYPTIGIGHLIMKQPVRNKVLSKQVGREITGNPGSITMEATTLFERDLADMQRDIKSHSKVGPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAGDWEYKAGRDSLWYQQTKGRASRVTMIILTGNLESYGVEVKTPARSLLAMAATVAKSS | |||||||||||||
5 | 4v0jA | 0.09 | 0.07 | 2.68 | 0.72 | CNFpred | --------------------------------DYFVVLVGDMIKEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYMRQIEKTI---------QYLIGSGMDPRTE-----NSPYLGFIYTSFQERATFIEHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEI------------DPDGTVLAFADMMRKKISMPAHLMYDG----RDDNLFDHFSAVAQRL | |||||||||||||
6 | 2pffB | 0.14 | 0.13 | 4.31 | 0.56 | HHsearch-2 | DQVLNLEFENCYLEGNDIHALAAKDTTLVKTKELI---KNYI------TARIMAKRSGEGNAQLVANTDDYFEE--LRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFGLNILEWLENDKDYLLSIPISCPLIGVIQLAHYVVTAKPGELRSYLKGATGQGLTSWESFFVSVRKAITVLFFIGVRCYPNT--SLPPSILE-----------DSLENNEGVPS--PMLSISNAKNGPPQSLYGLNLRKA | |||||||||||||
7 | 5cwmA | 0.08 | 0.07 | 2.79 | 0.77 | Neff-PPAS | -EDELKRVEKLVKEAEELLRQAKEKGS----EEDLEKALRTAEEAAREAKKVLEQAEKE--------GDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQG------DPEVALRAVELVVRVAELLLRIAKESG----------SEEALERALRVAEEAARLAKRVLELAEKQ----GDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKE | |||||||||||||
8 | 1ct9A3 | 0.23 | 0.04 | 1.12 | 0.33 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYSWIDTLKEVAAQLETARFRFP--YNTP------TSKEAYLYREIFE- | |||||||||||||
9 | 5cwiA | 0.10 | 0.09 | 3.24 | 0.50 | SP3 | EKLCKKAESEAREARSKAEELRQRHPD----SQAARDAQKLASQAEEAVKLACELAQEHPNADI-----AKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAE--------AVKLACELAQEHPN-ADIAKLCIKAASEAAEAASKAAELAQRHPD----SQAARDAIKLASQAAEAVKLAC------ELAQEHPNDIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVK | |||||||||||||
10 | 6gupA | 0.06 | 0.06 | 2.38 | 0.80 | PROSPECTOR2 | WPKGGLPTTTTTRKPDGLATTSYQSWGLGHLDRDTNEIAQCLKYIKEYKTEKFGGSASSNPHTHTVERMSDREAIQWVLPAEIRPVFEKLTSMAREAARDADAGTDVLLP----------LAMTSLVYPAHTPLSARRFLSLT-----------SPESPESPSEDDLFSSDLSDEQLGKTFGMIREQ-------GLLRGKQSVPAWVDKDTLLSRWRNATDHNGEAAIWDENALSNDDQAEPRNFLVNKVLKA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |