Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MQTQNGGRPTILPKMYEEPLFSQIIDKIESGCNDREIYTSLHCSAKTFRKWRDDNIKAYDEAKGIARGNLLELAESALASKLTVRTLKETETIYDADGNVEKVKVKEKELDKDSLVAMMVAKAGNPELYNPTEWRRLQQEESSAHDLKAKIEELDDYKLSKYETPKIEVPKGFE |
1 | 3hefB | 0.12 | 0.09 | 3.07 | 1.33 | SPARKS-K | | ------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAI-----------PDA-----AEVAKARLRVDTRKWALARMNP-----RKYGDKVTNELVGKDGGAIQIETSPMSTLFG------------ |
2 | 3hefB | 0.12 | 0.09 | 3.06 | 1.61 | FFAS-3D | | --------PSDY----MPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAK-ATEARADSIFEEIFEIADNAIPDAAEV---------------AKARLRVDTRKWALARMNPRK-----YGDKVTNELVGKDGGA------------IQIETSPMSTLF- |
3 | 3hefB | 0.11 | 0.08 | 2.89 | 1.73 | HHpred | | --------PSD----YMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKA-TEARADSIFEEIFEIADNAIPDAA---------EV------AKARLRVDTRKWALARMNPRK-----YGDKVTNELVGKDGGAIQIETSMST---------------- |
4 | 3hefB | 0.15 | 0.11 | 3.69 | 1.41 | MUSTER | | ------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADN------------AIPDAAEVAKARLR----VDTRKWALARMNPRKY-----GDKVTNELVGKDGGAIQIET---------SPMSTLFG--- |
5 | 3hefA | 0.14 | 0.09 | 3.16 | 0.69 | CNFpred | | ---------------YMPEVADDICSLLSSGESLLKVCKRPMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIAD----------------NAIPDAAEVAKARLRVDTRKWALARMNPRKYG-----DKVTNELVGKDGGAIQIE--------------------- |
6 | 3hefB | 0.11 | 0.08 | 2.91 | 1.41 | HHsearch-2 | | --------PSD----YMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKA-TEARADSIFEEIFEIADNAIPDAA---------EV------AKARLRVDTRKWALARMNPRK-----YGDKVTNELVGKDGGAIQIETS----PMSTLFG-------- |
7 | 3hefB | 0.12 | 0.09 | 3.05 | 1.21 | Neff-PPAS | | ------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAI----------------PDAAEVAKARLRVDTRKWALARMNPR-----KYGDKVTNELVGKDGG---------------AIQIETSPMST |
8 | 3hefB | 0.12 | 0.09 | 3.06 | 1.88 | HHsearch | | --------PSD----YMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKA-TEARADSIFEEIFEIADNAIPDAA---------EV------AKARLRVDTRKWALARMNPRK-----YGDKVTNELVGKDGGAIQIETSMSTLF-----G-------- |
9 | 3hefA | 0.11 | 0.07 | 2.72 | 1.02 | PROSPECTOR2 | | --------PSD----YMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKA-TEARADSIFEEIFEIADNAIPDAAE---------------VAKARLRVDTRKWALARMNPRK-----YGDKVTNELVGKDG-------------------GAIQIETS |
10 | 3hefB | 0.12 | 0.08 | 2.84 | 1.41 | SAM | | --------PSD----YMPEVADDICSLLSSGESLLKVCKRPGMDKSTVFRWLAKHEDFRDKYAKA-TEARADSIFEEIFEIADNAIPDAAEVAKA---------------RLRVDTRKWALARMNPRK-----YGDKVTNELVGKDGGAI------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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