Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GWEFGGGAPQNGAAEDKKTEYLLEQIKIPSWDRNNIPDENEQVKEDPQEDNKDEDEDEETETENLETEDDNNEEIEENEEDDIDEESVEEKEEEEEKKEEEEKKEEKKEEKKPDNEITNEVKEEQKYSSPSDINAQNLISNKNKKNDETKKTAENIVKTLVGLFNEKNEIDSTINNLVQEMIHLF |
1 | 5nnvA | 0.12 | 0.12 | 4.36 | 1.03 | MUSTER | | SVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTEELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYEREL |
2 | 2otoB | 0.11 | 0.08 | 2.93 | 1.64 | Neff-PPAS | | -------------------------------------------AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE----- |
3 | 4tqlA | 0.19 | 0.18 | 5.78 | 1.00 | SPARKS-K | | IQKAIELMRKIFQEVKQEVEKAIEEMKLYDEAKKKIEQMIQQIKQGGDKQKMEEKKVKDKMEKLLEKLKQIMQEAKQKMEKLQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDD---ELLEKIKK----NIDDLKKIAEDLIKNIKEAKKIAEQLVKRAKQLIEKKQVAEELIKKILQLIEKAK |
4 | 2qihB | 0.10 | 0.08 | 2.77 | 0.71 | FFAS-3D | | -------------------------------------------TDRIATAELGIAENKKDAQIAKAQANENKDGIAKNQADIQLHDKKITNLGILHSMVARAVGNNTQG----VATNKADIAKNQADIANNIKNIYELAQQQDQHSSDIKTLAKVSAANTDRIAKNKAEADASFETLTKNQK--- |
5 | 3kkbB | 0.15 | 0.04 | 1.45 | 0.27 | HHpred | | ------------------------------------------------------------------------------------------------------------------------------------SNAQEQRSHHYATIEVSQQLRQLLGDQLVILLRETPDGQ-ALERSQNDFRRVL |
6 | 6etxG | 0.03 | 0.03 | 1.88 | 0.98 | MUSTER | | RSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNPELAADWL |
7 | 2tmaA | 0.13 | 0.10 | 3.54 | 0.59 | CNFpred | | ---------------------------------------LNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDL----ERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS |
8 | 3kkbB | 0.15 | 0.04 | 1.45 | 0.42 | HHsearch-2 | | ------------------------------------------------------------------------------------------------------------------------------------SNAQEQRSHHYATIEVSQQLRQLLGDQLVILLRETPDGQ-ALERSQNDFRRVL |
9 | 4gkwA | 0.12 | 0.10 | 3.61 | 1.59 | Neff-PPAS | | ------------------------------EDKEDEVADLKQDTESLQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRKLGELEA-DLKEKDSMVESLTETIGILRKELENEKLKAAENMDSFEKLSMENENLKEKIAHYR |
10 | 5j10A | 0.15 | 0.05 | 1.63 | 0.48 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------TDELLRLAKEQAELLKEIKEIARLVKEIDELLKTLAELVRKLKELVEDMERSMKEQLYI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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