Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MYGTCETLCRLLREQYPAETPLNLIIWSPADIEALADGMEYSVSEQDTRAVLARMDAIPEEQRLESGVSAGAVMDLIEQVKEAVPAVMVPADLLETLLTTAEQALWHREWTARDSNHPVPESVTRRLADAAKVRALL |
1 | 5cwnA | 0.15 | 0.15 | 4.89 | 0.64 | SPARKS-K | | ALELAKRLVEQAKKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAAESALEVAKRLSKEGDPELVLAAKVALRVAELAAKNG-----DKEVFKKAAESALEVAKRLVEVASKEG--DPELVEEAAKVAEEVRKLA |
2 | 5cogA | 0.11 | 0.09 | 3.42 | 0.78 | FFAS-3D | | -YTSKKELKEEIEKK-------------YEKYDAEFET----ISESQPSENLSYQLGWVNLETPAPGYKWNNLGGLYQSFYKKYGIYSI-KEQRAKLREAVNEVYKWISTLSDDQAGNRKAPFTNFRGKIRKWKRLV |
3 | 1x1oA | 0.13 | 0.09 | 3.01 | 0.30 | HHpred | | AAGGVGEAVRRAKARAPHYLKVEVEVRSLEELEEALEAADDNFPLEALREAVRRVGG-RVPLEASGNMTLERAKAAAEA---GVDYVSVGALT-------------------------------------------- |
4 | 3e7qB2 | 0.14 | 0.12 | 4.21 | 0.69 | MUSTER | | --PGRPRLSAFFEASFSAELL------DPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEY----------RALLVGVLRQLAEEGGWADFDAELAAISLSALLDGLWLESGLNPAT-FTPRQGVQICEAWVDGLEAGA |
5 | 5cwbA | 0.09 | 0.08 | 3.09 | 0.55 | CNFpred | | --RIVAEIVEALKRSTSEDEIAEIVARVISEVIRTLKESGSSCVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSYEVIKECVQRIVEEIVEALKRSG--------TSEDEINEIVRRVKEVERTL |
6 | 2pffB | 0.13 | 0.12 | 4.28 | 0.45 | HHsearch-2 | | EPTTPAELVGKFLG-YVSSLPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE---NDTTLVKTKELIKNYITARIMAKYHVLV-GD----LIKFSAETLSELIILEWLENPSNLLSIPISCPLILENNEGV |
7 | 6egcA | 0.17 | 0.17 | 5.50 | 0.68 | Neff-PPAS | | ---TRTEIIRELERSLREQEELAKRL--KELLRELERLQREGSSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRQGNEIIRELERSLREQEELAKRLKELLRELERLQREGSSDVRELLREIKELVEEIEKLA |
8 | 1djiB1 | 0.06 | 0.02 | 0.98 | 0.29 | HHsearch | | ------------------------NKMNFKELKDFLKELNIQVDDGYARKIFRECDHS-----QTDSLEDEEIETFYKMLTQ------------------------------------------------------- |
9 | 1tmhA | 0.15 | 0.15 | 5.14 | 0.68 | SP3 | | LNGSVHELVSNLRKELAGVAGCAVAIAYIDMAKREAEGSHIMLTGETSAAMLKDIGAQHSERRTYHKESDELIAKKFAVLKEQTEAENEAGKTEEVCARQIDAVLKTQGAAAFEGGTGKSATPAQAQAVHKFIRDHI |
10 | 5cogA | 0.10 | 0.09 | 3.27 | 0.56 | PROSPECTOR2 | | EYTSKKELKEEIEKK-------------YEKYDAEFETKDEKVEVNLLLEWEAKEIAGYNVETPAPGYKWNNLGGLYQSFYKKYGIYSIKEAKLREAVNEVYKWISTLSDDELFQAGNRKWATTKARGKIRKWKRLV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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