Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NYYEHHIGDYAEATAHLSFIEDAAYSRLIRKYYATEKPLPADQKAVQRLVGARTKEEREAVATVLEEFFTLQDDGWHNTRCDEEIA |
1 | 6iv7A3 | 0.08 | 0.07 | 2.71 | 1.10 | MUSTER | | -------------TCQVAVARIGSDLGLFKHLSQCASPQS--AEELADHLGCGRELMSRLLRYMASVMVQQTDIKYISSNITQTLA |
2 | 2pjpA | 0.12 | 0.09 | 3.28 | 1.10 | SP3 | | ----------------FSEEQQAIWQKAEPLF----GDEPWWVRDLAKETGTDEQAMRLTLRQAAQQITAIVKDRYYRNDRIVEFA |
3 | 3nw0A2 | 0.10 | 0.09 | 3.42 | 0.88 | SPARKS-K | | ------TTSISKMATDFAENELDLFRKALELIIDSTGFA--SSTNILNLVDMRKKEAEQVLQKFVQNWLIEKEGEFTLGRAILEME |
4 | 6h24A | 0.14 | 0.12 | 3.98 | 0.72 | FFAS-3D | | SDLIVKDNALMNASYNLALVEQRLILLAIIEARETGKGINANASSYINQFNVERHTAYQALKDACKDLFARQ-------------- |
5 | 2v79B | 0.10 | 0.08 | 3.05 | 0.48 | HHpred | | ----STIPNLLLKQLGLNETELILLLKIKMHL-EKGSYFP-TPNQLQEGMSISVEECTNRLRMFIQKGFLFINGIKFEK------- |
6 | 3k2zA1 | 0.05 | 0.03 | 1.71 | 1.10 | MUSTER | | ---------------DLTERQRKVLLFIEEFIEKNGYPPS--VREIARRFRITPRGALLHLIALEKKYIERKPRALRISKSIR--- |
7 | 3dv8A | 0.10 | 0.09 | 3.43 | 0.59 | CNFpred | | -------MWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHREVITRMLRYFQVELVKLSRGKITILDSKRLET |
8 | 1lvaA2 | 0.18 | 0.13 | 4.17 | 0.39 | HHsearch-2 | | ----------------FSETQKKLLKDLEDKYRVSR-WQPPSFKEVAGSFNLDPSELEELLHYLVREGVLVNDEFYWHR------- |
9 | 2gauA2 | 0.13 | 0.12 | 4.03 | 0.85 | Neff-PPAS | | ---------RTVTLTQKHVRGRLAETLLILKENFGFESIYLSREELATLSNMTVSNAIRTLSTFVSEMLALDGKRIKIIDCDRLQK |
10 | 1lvaA2 | 0.18 | 0.13 | 4.17 | 0.50 | HHsearch | | ----------------FSETQKKLLKDLEDKYRVSR-WQPPSFKEVAGSFNLDPSELEELLHYLVREGVLVNDEFYWHR------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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