>PF07058 (550 residues) DELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAVEELTAEYE KLDEKLKLTESLLESKNLELKKTNDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAIL APLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMVDDMQNKNQ ELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVRELEEAVLAGGAAANAVRDYQRKVQE MNEERKILDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDK LAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRRLSLGGADN TSKISPNGMLARRSPSFNSRSSLSTSSSLVIKHAKGTSRSFDGGTRSLDRGKVLGNGPHL LNRSTDAVRDCETTDVWKAANTEEKGSEATNSSSTDTVSGVLYDMLQKEVISLRKACHEK DQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRLDKDQENKAKRPG NFKGPGTTSQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAVEELTAEYEKLDEKLKLTESLLESKNLELKKTNDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMVDDMQNKNQELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKILDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRRLSLGGADNTSKISPNGMLARRSPSFNSRSSLSTSSSLVIKHAKGTSRSFDGGTRSLDRGKVLGNGPHLLNRSTDAVRDCETTDVWKAANTEEKGSEATNSSSTDTVSGVLYDMLQKEVISLRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRLDKDQENKAKRPGNFKGPGTTSQ | |||||||||||||||||||
1 | 6f1te | 0.13 | 0.12 | 4.25 | 1.38 | SPARKS-K | ERGEKPKVTDFGDKVFLNQLQSGVNRWIREIQKVTQEISFWLNLERALYRIQEKRSPEVLLTLDILKHATVSFDTDT-GLKQALETVNDYNPLMFPLN-------DLLSATELDKIRQALVAIFTHLRKIRNTIQRALRLVEAISRDLSSQLLKVLGYEEFEKVMVACFEVFQTWDDEYEKLQVLLRDIVKRKRPAHRKLQARLDQMRKFRRQHEQLRAVIVRVANAIEEVNLAYENVKEVKEGTEAWEAAMKRYDERIDRVETRITARLRDQLGTAKNANEMFRIFSRFNA----LFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQSQACKMSHVRDLPPVDRQLTAYMKRVEDVLGKGEGQKLKQDGDSFRMKLNTQEIFDDWARKVQQRNLGVSGRIFTIESTRVRGRTGNVLKLKVNFLPEIITLSKEVRNLKWLGFR-------VPLAIVNKAHQANISLIESVRTYERTVEERNTISLLVAGLKKEVQALIAEGIARLAETVFNFQEKVDDLLIIEEKIDLEVRSLETCMYDHKTF | |||||||||||||
2 | 2tmaA | 0.14 | 0.07 | 2.43 | 2.27 | FFAS-3D | ----------DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLV------------EEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQ---LKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEI---KTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS----------------------------DKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 1sjjA | 0.10 | 0.09 | 3.52 | 1.21 | MUSTER | RRTIPWLENRAPMQQKLEDFRDYRRLHKPPKVQEKCQLEINPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETALSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEVNYKPKIDQLEGDHQIQEALIFDNKHTNYTMEHQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARPNRMGVVT--------QAFIDFMSRETADTDTADQVMASFKILAG----------ITVDELRRELPPDQAEYCIARMAPYNGRDAVPGA-STALYGESD | |||||||||||||
4 | 1hciA | 0.10 | 0.07 | 2.42 | 1.16 | CNFpred | ------------IAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILL-SLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDY---------------HDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETI---DQLHLEFAKRAAPFNNWMEGAMEDLQDM--FIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSS--NPYSTVTMDEL--------------RTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITG------------------------------------------------------------------------------------------------------------------------ALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQ-TMEHIRVGWELLLTTIARTINEVETQILTRD----------------------- | |||||||||||||
5 | 6f1tX | 0.22 | 0.11 | 3.49 | 0.74 | HHsearch-2 | ----------------------VIRQKEKDLVLAARLGKALLE-------RNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGE-------------------------WEGRVSELETDVKQLQDELERQQLHLREADREKTRA--------------------VQELSEQNQRLLDQLSRAS-------EVERQLSMQVHALKEDFREKNSSTNQ---HIIRLESLQAEIKMLSDRKRELEHRLSATL----------------------------EENDLLQGTVEELQDRVLILERQGDKDLQLHQEVRLSYRQLQGGGGGGGGGGGGG----G--GGGG--GGGGG---GGGGGGGGG-------GG-GGG-GGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5xjcI | 0.07 | 0.07 | 2.89 | 1.91 | Neff-PPAS | ------------LKLSPESAEEYYLKSSDRLDEAAQRLATVNDERFVSKAGKSNYHELCDLISQNPDKQSLNVDAIIRGGLTRFTQLGKLWCSLADYYISGHFEKARDVYEEAITVMTVRDFTQVFDSYEESMIAAKMETASEEEEDDVDLELRLARFELISRRPLLLNSVLLRQNHHVHEWHKRVALGRPREIINTYTEAVQPFKATGKPHTLWKFYEDNGQLDDARV--IATKVNFKQVDDLASVWCCGELELRHENYDEALRLLRKATLPARRAEYFDGSEPVQNRVYKSLK--WSMLADLEESLGTFQSYDRILDLRIATPQIVINYFLEEHKYFEESFKAYESLFKWPNVSDIWSTYLGGRKLERARDLFLDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIAEIYGVTHTRGIYQHAREMCLRFADMEDFEVRHGNEDTIKEMLRIRRSVQATYFMASQMLKVSGSATGTVAPGQSGMDDMKLLEQRLAAEAERDQPLRAQSKLFVRSDASREELAELAQQVN | |||||||||||||
7 | 2tmaA | 0.16 | 0.07 | 2.48 | 1.03 | HHsearch | ---------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDKLKGTEDELDKYSEALKDAEKKATDAEADVASLNRRLDRAQERLATALQKLEEAEKA-----ADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDAERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEA---ETRAEFAERSVTKLEKSIDDLEDELYA-----------------------------------QKLKYKAISEELDHALNDMTS---------------------I-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 1cii | 0.12 | 0.10 | 3.46 | 1.58 | PROSPECTOR2 | EIMAVDIYDDSPTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISPREARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNYLLSHSGLDKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSE---------------------------------------------------------------------------------------------------KYGAKAEQLAREMAGQAKGKKIRNVEEALK--TYEKYRADIAKDRAAIAAALESVKLSD-----ISSNLNRFSRGLGY-AGKFTSLADWITEFGKAVRTENWRPLFVKTETIIAGNANKFW | |||||||||||||
9 | 5yfpA | 0.10 | 0.02 | 0.60 | 0.18 | SAM | -------------------------------------------------------------------------------------------------------------NDECHRIIPTLSLFLMEMSNFSNDIENVESQDNGLQVESANKKLLWNTLDELLKTVSLDEISLNQLLECPIR-EKNLPWMENQLNLLLK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5lj3T | 0.08 | 0.08 | 3.00 | 1.23 | SPARKS-K | EYEIQKTPQNILTWKRYIEYWKQIRWLYERFCSQEDYIRWESRIFWLFQRCLRDCDRICLSYLELAIMIRHALASSLMKMEMHRKVWDPVIKFVEEKDEAELINVLLVKGFT----IWSSHILERYQQKRNESLATLALTITIKSVYEKYNFNYLASLEKLYEEFMRQMNKWLFLILSLAKYYIRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKENDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSAAE----------KCNVYSEAILKIDPRKRLWCSYGDLYWRSNAI-STARKLWTQSLKVPYPYIEDNWADRELDHVPTNPEILLSLRKYIDYLEAYIFNKTKMAYNTVIDLRPAMAENFYEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSH--PEHIRFLFEKALKNLCSNGIDCKTERSKSIEILRRGAVESRLQLWRMCISKAES--VTRELYQECIQILEFVIKFSDFEAREILAYGAKLNTELWDSFEIFELK----------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |