Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | DQFLVQVVTAYVASLCRNSLVIQPVTSELMVRALVTRGAAARLRAALRRGALGDARALACALLSLGHLDPAAAQLALDMLWRLKAYEEVVEVLLSWEEPVGAAGAARQAGTTWLSLPPRKLLAAARAHAQAHGRPTAFTAIYHALQNRNERTRGSPHFLK |
1 | 3jd5o | 0.11 | 0.10 | 3.59 | 0.13 | HHWb | | LMEQIDVTLKWYKDLIPSVFFPHSQTLIDLLQALDVANRLEIWKDSKEYGHTFRSDLKEEILMLMAQHPPELQAAFADCAADIKSLNYIAILFLRAGRTQEAWKMLGLFR--KHNKIPNEFMDSAK----ASSSPAQAVEVVKLANSFS----------- |
2 | 6au8A | 0.12 | 0.12 | 4.20 | 0.77 | SPARKS-K | | HTEARELMYSGALLFFSHGQQSAADLSMLVLESLEKAELLENLAKVFSLMDSPERVTFVSRALKWSSGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLVEYSTSRGFEVDMFVAQAVLQFLCL-KNKSSASVVFTTYTQKHPSIEDGPPFVE |
3 | 4gyoA2 | 0.10 | 0.09 | 3.28 | 1.02 | FFAS-3D | | EAYMIAAAYYNVGHCKYSLGDYKEAEGYFAAAIFEEHNFQQAVQAVFS---------LTHIYCKEGKYDKAVYDRGIKSAAEWEDFRLIHELYLGSGDLNVLTECFDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQR---- |
4 | 3jd5o | 0.11 | 0.10 | 3.59 | 0.13 | HHpred | | LMEQIDVTLKWYKDLIPSVFFPHSQTLIDLLQALDVANRLEIWKDSKEYGHTFRSDLKEEILMLMAQHPPELQAAFADCAADIKSLNYIAILFLRAGRTQEAWKMLGLFR--KHNKIPNEFMDSAK----ASSSPAQAVEVVKLANSFS----------- |
5 | 6g70A2 | 0.11 | 0.10 | 3.64 | 0.67 | MUSTER | | ---INEARIILRTFEECV--LGLAMVRLRRVSLERRHGNEHLLQDAIKNAKSNNEIKLARHLFKIQKNLPKSRKVLLEAIEKDKEYLNLLEMEYSCDLEENILNCFDKA-GSLPIKMRITFSQRKVEFLEDFGSD--VNKLLNAYDEHQTLLKEQDTL-- |
6 | 5ormA | 0.10 | 0.09 | 3.48 | 0.75 | CNFpred | | ---RLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMGIVPNVVTYTTLISGLGRLEEALELFEEMK-DVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKA----GRLEEALELFEEMKEKGIVPDVVTY |
7 | 3jd5o | 0.11 | 0.10 | 3.59 | 0.55 | HHsearch-2 | | LMEQIDVTLKWYKDLIPSVFFPHSQTLIDLLQALDVANRLEIWKDSKEYGHTFRSDLKEEILMLMAQHPPELQAAFADCAADIKSLNYIAILFLRAGRTQEAWKMLGLFR--KHNKIPNEFMDSAK----ASSSPAQAVEVVKLANSFS----------- |
8 | 1wy6A | 0.11 | 0.10 | 3.64 | 0.63 | Neff-PPAS | | ---IIRKLMDAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESI---DCRYMFQVLDKIGSYFKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILNE---VSASILVAIANALRRVGDERDATTLLIEACKKGEKEACNAVNTL- |
9 | 5cqsA2 | 0.15 | 0.08 | 2.74 | 0.62 | HHsearch | | ---YTDAAVAYE-----LG------KLKEA-GAYQSAKRWREA-SIAV-QKFPEEEELISSLTFEHR-----YVDAADIQLELDNVKEAVALYCKAYRYDIASLVAIKA--K------------------------------------------------ |
10 | 5ch6A | 0.12 | 0.12 | 4.17 | 0.70 | SP3 | | SRQASLLILEFFLLSDCTEMEPSDLAAVTWRKRLINEGGRGLLLLVASFGIPALRNEDLRNLIRLSCPKEISDALSRFLLAR---VPDVIQGMIKNQMNVEAVDFAYTFGLEE-KFPLTSFLREHKEEWKRTRELSAMKSVTRCLEDHR--VDPSKLLSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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