Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QTDTEVEFTCVTCVPESFAVDIESLEEIRFIFNTDKLYCCLDKTTEECNIPGIGDIEVDVCVVKIVGAIEYILNAYPAVRGDKYGRGEGDIEVIPDREANVCCEGTTFVDNVVGAFAVDDPELIEDPCEELDFCDIEGVLTDISIITDEESDKQCIKFEGRFEL |
1 | 6dg5B | 0.05 | 0.05 | 2.30 | 0.71 | SPARKS-K | | AVKNCSHLECFYNSRANVMWSHLNVTTCHVHAKSNL-RHWNKTCELTLVRQASWACNLILLDINVVCRRVKTCDFHPFDNLRLVAPHSLQVLHIDTQRCNISWKVSQVSHYILEFEARRRLL--GHSWEDASVLSLKQRQQWLFLEMLIPSTSYEVQVRVKAQR |
2 | 2jkrM3 | 0.10 | 0.08 | 2.96 | 0.54 | FFAS-3D | | -------------IGEGIKYRRN-----ELFLD------VLESVNLLMSPQGQ------VLSAHVSGRVVMKSYLSGMPENDKIVIETSKSGKQSIAIDDCTFHQCVRLSKLMRYRTTKDIILVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWRYIGRSGIYET |
3 | 2jxmB | 0.12 | 0.09 | 3.02 | 0.27 | HHpred | | ----GLNVGAVLMLPEGFKLAPPEVEEVDTPYSETDEN-ILLAGPLPGE--DY--QEMIFPILAGVYFGKYSIHLGG--NRG---RGQVYPTGELSNNNAFSASIAGTIAAIEGFDVTIQ----PEDGDA-VVTSI---------------------------- |
4 | 2vbeA4 | 0.08 | 0.08 | 3.13 | 0.82 | MUSTER | | GFKNAVYVHDCLDLHEQLDLD-YCGSTGVVIENVNGGFSFSNSWIAADADGTEQFTGIYFRTPTSTQSHKIVSGVHINTANKNTAANNQSIAIEQSAIFVFVSGCTLTGDEWAVNIVDINECVSFDKCKPLRYLGVSVTDCYLAITEVQKPEGRYNTYRGCSGV |
5 | 4ktpA | 0.07 | 0.05 | 2.06 | 0.97 | CNFpred | | ------ALLTLLHVD-GEPFIMSEAASFERTLDLS---QGVTSRKVSQRMKNGATITIHEEKFASAVLMKYTVESDQ--------------------DTDAVLDTGIDYDVWSINGD------------HLQGHHYFSHPTGDGVTAKTVSYEDTVTVVETCSL |
6 | 2z64C | 0.07 | 0.05 | 2.01 | 0.40 | HHsearch-2 | | SSDAIISYSYCDHLPISISSEPCIRRGTNGF------------VHVEFILKY-LYFN--LF-ISVNS-IELPKRK-------EVLCHSFCRALKG-ETVNT--SIPFS-----------FEI--LFPKGHYR---C-------VAEAIAGDEEKLFCLNFTIIH |
7 | 5ewoA | 0.08 | 0.08 | 3.14 | 1.07 | Neff-PPAS | | DHYLTMQGFTSIASVDWYTIDPAPIKGLQVLVNISKKADVYAVKQFVTAQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRASATGDATTLLVRGDTYTAGISFTGGWYLLTNTSIVDGAMPPGWVWNNVELKTNTAYHMDKGLVHLIMPLPESTQMCYEMLTSI |
8 | 2v42A2 | 0.15 | 0.08 | 2.68 | 0.37 | HHsearch | | -EKAKFSWT-PTWLPQGFSEVSSSLPIESRLY-SDGLF-SFSVNVNRATPSSDQMLRRTVST-SVRDNAEITIVG-------------------------------------------ELPPQ-TAKR-------I---AE--NIKFG-A-------------- |
9 | 6fl9A | 0.09 | 0.09 | 3.26 | 0.66 | SP3 | | QKEENFSVVGSLRIPL-LAFEHAPGEPKHRTYTLATFLKLLEEKQAFTYHNQQGRMDFQNRLISLSGTVMYLERFTSTFQAPAF---DFRLFPFDNQLFFIHVDSIFPQHL-FRFQEMQGFSGLGDQLGEEEWIVTEVNTH--LTTHNEFTKGDASRFVLEFHA |
10 | 5ewoA | 0.08 | 0.08 | 3.11 | 0.69 | PROSPECTOR2 | | SGHYNVKIAKWYTIDFQPSEAPAPIKGLQVLVNISKKADVYAVKQFVTAQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTYTA-----GISFTQNTSIVDGAMPPGWVWNNVELKTNTAYHMDKGLVHLIMPLPESTQMCYEMLTSI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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