Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LNLDVTAMLAYVSGLTNGRCNFKFKEPVLTQQAEWERAKPVKPVLDQLFEGKSLFCCESAVKDFQSIVSTLGGPGEVSRANELLARITVIPDMTSLRAQAQLKLGGKIKQRSLAVFGTGDAVRAVTVSANAGFVRAAKCQGVEFAVFVHESRALTEGKEHDAR |
1 | 4xgqA | 0.13 | 0.10 | 3.41 | 0.65 | SPARKS-K | | MVIDTSALVAMLSD------------------------EPDAERFEAAVEADIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARTYGKGRHRAGL-------NYG-----DCFSYGLAKISGQPL---LFKGEDFQHTDIATVA |
2 | 6a7vA | 0.14 | 0.10 | 3.55 | 0.84 | FFAS-3D | | --IDTSAWVEYFRA------TGSIAAVEVRRLLSEEAA--------------RIAMCEPIAM---EILSGALDDNTHTTLERLVNGLPSLNVDDAIYRAARRAGETVRSINDCLIAALAIRHGARIVHRDADFDVIARITNLQAA------------------ |
3 | 3h87B | 0.14 | 0.10 | 3.58 | 0.42 | HHpred | | WLIDKSALVRLTDS-------------------------PDMEIWSNRIERGLVHITGVTRLEVG---FSAECGEIARREFRPLSAMPVEYLTPRDRAQADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPP----------- |
4 | 5sv2A | 0.14 | 0.10 | 3.57 | 0.87 | MUSTER | | YLLAKSAAYRA-------------------------HLPAVRHRLEPLMERGLLARCGITDLEFGVSAR---SREDHRTLGTYRRALEYVNTPDTWEIQEALTDKGFHRSVKLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAPG------------ |
5 | 4ldqA | 0.13 | 0.12 | 4.07 | 0.77 | CNFpred | | PAIALVGCLSLAVELQAGAGGP--GLAALVAFVRDKL-----SFLVTAR----AVNMARAARDLADVAAREAEATEEAVRERVICCTEDML-SIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGLGVIRSLHSLGRLEHAFCTETRPYNQGARLTAF |
6 | 3h87B | 0.13 | 0.10 | 3.41 | 0.77 | HHsearch-2 | | WLIDKSALVRLTDSP------------------------D-MEIWSNRIERGLVHITGVTRLEVGFSAE---CGEIARREFRPLSAMPVEYLTPRIRAQTLLGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERL--THRPP--------- |
7 | 5sv2A | 0.15 | 0.12 | 3.91 | 0.82 | Neff-PPAS | | --LAKSAAYRA-------------------------HLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRAWEIQEALTDVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAPG------------ |
8 | 3zvkA | 0.16 | 0.12 | 4.07 | 0.83 | HHsearch | | YMLGTNICVYAINKH--P--------DS------------YYNNLELLAKNNTIAISSIVLAELQYGVSKSKKKENQSKLDIFLSRLEIIDFSAKCYYRTELEKGLIIGNNDLLIASHAIAENATLVTNNKEFKRI---PNLILENWDK-------------- |
9 | 5sv2A | 0.15 | 0.11 | 3.73 | 0.93 | SP3 | | L-LAKSAAYRA-------------------------HLPAVRHRLEPLMERGLLARCGITDLEFGVSAR---SREDHRTLGTYRRDLEYVNTPDTWEIQEALTDKGSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWV--VAPG---------- |
10 | 1v96A | 0.08 | 0.07 | 2.65 | 0.71 | PROSPECTOR2 | | PLFDSLALIKMHSQ----------NMKRILEVTLAK---------------FTVNLSIVTVYRY---LTARLKKNIEAEFEILKDIYNIVPLLDDIAEANLIKKEITLDMEDIITATTAIYTNSLLVTDDPKRYEPIRRFGLDTMPLDKFIKEVELMVEKELI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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