Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MEFGKELLVYMTFLVVVTPVFVQAIKKTELIPSKWLPTVSILIGAILGALATFLDGSGSLATMIWAGALAGAGGTGLFEQFTNRSKKYGKDDK |
1 | 4mt1A2 | 0.12 | 0.12 | 4.17 | 0.94 | SPARKS-K | | EISIEKVIHTLIEAMVLVFVVMYLFLQNI--RYTLIPTIVVPISLLGGFAFISYMGMSNVLTMFAMILVIGIVVDDAIVVVENVERIMAGEGL |
2 | 4x5mA | 0.08 | 0.08 | 2.92 | 0.77 | FFAS-3D | | -DTILLTGLFAAFFTTFAPQSIKTIRTRNTEGISVVMYIMFLTGVISWIAYGIMRSDFAVLIANIVTLFLAAPVLVITLINRRK--------- |
3 | 4p6vE | 0.14 | 0.13 | 4.39 | 0.27 | HHpred | | -EFL-NFITFIGVIAALVQILEMILDRFF--PPIFLPLICAIFGGVSFMV---QRD-YSFAESVVYGFGSGVGAIVALAGIREKMKYSDVPP- |
4 | 5ezmA3 | 0.15 | 0.14 | 4.70 | 1.00 | MUSTER | | RSWGKQLIGMAIVAACGLLASPVVATLANHIPNVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS------- |
5 | 4u8yA | 0.09 | 0.09 | 3.29 | 0.77 | CNFpred | | KISIHEVVKTLVEAIILVFLVMYLFLQN---RATLIPTIAVPVVLLGTFAVLAAFFSINTLTMFGMVLAIGLLVDNAIVVVENVERVMAEEGL |
6 | 2wwbA2 | 0.18 | 0.17 | 5.59 | 0.43 | HHsearch-2 | | EDP-VHAVVYIVFMLGSCAFFSKTLKEQQVMLNRYIPTAAAFGGLCIGALSVL----ADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGS |
7 | 5ezmA3 | 0.13 | 0.12 | 4.12 | 0.82 | Neff-PPAS | | RSWGKQLIGMAIVAACGLLASPVVATLNANAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS------- |
8 | 4p6vE | 0.13 | 0.12 | 4.13 | 0.57 | HHsearch | | VEFL-NFITFIGVIAALVQILEMILDRFFPLYGIFLPLICAIFGGVSFMV---QRD-YSFAESVVYGFGSGVGWMLALAGIREKMKYSDVPP- |
9 | 5naqA | 0.15 | 0.14 | 4.70 | 0.69 | SP3 | | VINGPKAVQVAYNMNLASAKTVARFHELCVRPE-------QQIGIILNLTPAYAASDDEFAELWSNNLFLDPAVLGHFEKLVERLTMDGVLWD |
10 | 5cwiA2 | 0.08 | 0.08 | 3.03 | 0.51 | PROSPECTOR2 | | ADIAKLCIKAASEAAEAASKAAELAQRHPDSQRDAIKLASQAAEAVKLACELAQEHPNADIAKKCIKAASEAAEEASKEASQKAEEVKERCER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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