Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | IKALLGALVVVLIGVLSKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRTTIVFGMWSIIPYFIYLLSLWYFTGVMRLPFALAGAVVCWSLCAWLLIIGWSRFH |
1 | 5cwqA2 | 0.11 | 0.10 | 3.75 | 1.00 | SPARKS-K | | EKAQRVLEEARKVSEEAREQGDEVLALALIAIALAVLALAEVACCRGNK---EEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRG |
2 | 6nf4A1 | 0.12 | 0.12 | 4.27 | 0.85 | FFAS-3D | | LSAQYGTNLLLLGVSVMLAKEEHLLSFITVLMLVQLVWMLCYMIRRERGGLTMLALLSLIPIVHALHTISQVHFLFERFGVIHAVFTNLLLWCFVSAMLFVMWKNI- |
3 | 5mlzA2 | 0.09 | 0.08 | 3.23 | 0.21 | HHpred | | VKFSIVGLSGILVNEGVNLIPKEIAVIPASILNNFFWNDIWTFKDIRRSIFSRLLKFHIAALSGAVVNFIVYW-ILLFIHYLIANLVGIVLSFGVRYVINRHVT--- |
4 | 4hzuS | 0.11 | 0.11 | 4.02 | 0.82 | MUSTER | | RMGLLVGGASGFLIDILTGYPVWCLFSLVIHGTQGLVVGWLLPRHHK-GIRSMLLPLLVGSLVMVIGYCLATTLLFGWPAGLASIFGNVVQVGFGAGVTLSIVGPLT |
5 | 3rkoB | 0.10 | 0.09 | 3.50 | 0.95 | CNFpred | | ATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ--TDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQ |
6 | 5mlzA2 | 0.08 | 0.08 | 3.26 | 0.59 | HHsearch-2 | | VKFSIVGLSGILVNEGFNLIPKEIAVIPASILNNFFWNDIWTFKDIRRSIFSRLLKFHIAALSGAVVNFIVYW-ILLFLHYLIANLVGIVLSFGVRYVINRHVTWAT |
7 | 4hzuS | 0.11 | 0.11 | 4.02 | 0.95 | Neff-PPAS | | RMGLLVGGASGFLIDILTGYPVWCLFSLVIHGTQGLVVGWLLP-RHHKGIRSMLLPLLVGSLVMVIGYCLATTLLFGWPAGLASIFGNVVQVGFGAGVTLSIVGPLT |
8 | 5mlzA2 | 0.14 | 0.09 | 3.21 | 0.54 | HHsearch | | ---------------------------------TIFEYLRIYRLMKWEGEIDRIVKFSIVGLSGILVNEGFLWLFVNLIPKEIAVIPAVELSILNNFFWNDIWTFK- |
9 | 6a2jA3 | 0.10 | 0.09 | 3.50 | 1.31 | SP3 | | PLQIGKKMQFHMIGILIY---SYIVVLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRY |
10 | 5cwqA1 | 0.08 | 0.07 | 3.00 | 0.62 | PROSPECTOR2 | | EELERESEARKRSEEARERGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEAR--KVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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