Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GGYYYQPLNQEPSEAPEDEEEERGDAAEQLQQVQQRIEVMGLHLPEAPPPDSDEEEDPEGAAAQRSRASIPMDADHVELVKRTMASVALPSLGVPPWAREISDDQWKDMVQHTLQSRQN |
1 | 6aqkA1 | 0.11 | 0.07 | 2.45 | 0.68 | SPARKS-K | | -------------KEDPALYKQQGGEYPYYSSFTIALQKLNIHYDSI-----IDMDNISKWAENMKPAARDISHDKFIEVQKTLGKIDAEWSGY------------------------- |
2 | 1flcB | 0.11 | 0.10 | 3.63 | 0.56 | FFAS-3D | | GIGGYLLGSRKESGGGVTKESAEKGFEKIGNDIQILKSSINIAIEKLNDRISHDEQA-------IRDLTLEIENARSEALLGELGIIR--ALLVGNISIGLQESLWE--LASEITNRAG |
3 | 2j2fA | 0.14 | 0.08 | 2.58 | 0.32 | HHpred | | ---------------------------------------------------AADE-KRETA--YTKEKLFEIDPDGTVLFADMMRKISMPAHLMYDFDHFSTAKDYADILEFLVGRWK- |
4 | 5appA | 0.08 | 0.08 | 3.00 | 0.70 | MUSTER | | -----KQIEDKIEEILSKIYHIENEIARIKKLIQNVDVRSTENAARSRANEQKIAENKKAIENKADKADVEKNRADIAANSRAIATFRSSSQNIAALTTKMKIEDKIEEILSKIYHIEN |
5 | 2y7cB | 0.21 | 0.13 | 4.28 | 0.44 | CNFpred | | -------------------------GQEQLQFYRKMLVHLG---------EDDKKLVQAVFHNV---STTITEPKQITALVSNMDSLDWYNG-----AHGKSRDDFGDMYEGLLQKNAN |
6 | 1ddtA3 | 0.10 | 0.04 | 1.56 | 0.46 | HHsearch-2 | | -------------------------------------------------------------------SCINLDWDVIRDIESLKEHGPIKNKMSESPNKTVSEEKAKQYLE-EFHQTAL |
7 | 2pmsC | 0.09 | 0.07 | 2.60 | 0.76 | Neff-PPAS | | ----------------SHMDAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEE----------EDYFKEGLEKTIAAKKA |
8 | 4gdkC | 0.25 | 0.03 | 1.04 | 0.29 | HHsearch | | ------------------------------------------------------------------------------------------------------MPRWKRHISEQLRRRD- |
9 | 5f3yA | 0.20 | 0.19 | 6.19 | 0.64 | SP3 | | LGFS---LQVAVYDKFWSLGSGCDHLMDAVAQCEQLARERGESQRQAPTPWHDSQEDPVSTELWSGEYNFEKEEELVELLARHCYVQLGATVKVPKLYRTKSPEKWASLVTAAHAKAQY |
10 | 5fvcA1 | 0.11 | 0.10 | 3.61 | 0.51 | PROSPECTOR2 | | YGAGQTMLRWRSSNNIMLGHVSVQAELKQVTEVYDLVREMGPESGLLHLRQSPK----------AGLLSLANCPNFASVVLGNASGLGIIGMYRG----RVPNTELFSAAESYAKSLKN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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