Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | YTGENIDVYFNTAMCQHSGNCVRGNANIFKLSRKPWIMPDNASVEEVKRVIDTCPSGALQYREK |
1 | 1sizA | 0.18 | 0.17 | 5.58 | 3.59 | SPARKS-K | | ----AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPDEELYNCAKEAMEACPVSAITIEEA |
2 | 4id8A | 0.15 | 0.14 | 4.72 | 1.23 | FFAS-3D | | -----LTIHVDQDKCQGHARCKALAPELFDLDDYGNAVVPADLIDKAWLAKSNCPENAIDITED |
3 | 4id8A | 0.15 | 0.14 | 4.72 | 1.17 | HHpred | | -----LTIHVDQDKCQGHARCKALAPELFDLDDYGNAKVPADLIDKAWLAKSNCPENAIDITED |
4 | 1sizA | 0.18 | 0.17 | 5.58 | 3.31 | MUSTER | | ----AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPDEELYNCAKEAMEACPVSAITIEEA |
5 | 4id8A | 0.16 | 0.14 | 4.70 | 2.21 | CNFpred | | -----LTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEK-DLIDKAWLAKSNCPENAIDITED |
6 | 6nbqI | 0.17 | 0.17 | 5.64 | 0.81 | HHsearch-2 | | SERFRGRIHFEFDKCIACEVCVRVCPNLPVVDWLKHYSIDFGVCIFCANCVEYCPTNCLSVTEE |
7 | 1sizA | 0.18 | 0.17 | 5.58 | 3.54 | Neff-PPAS | | ----AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPDEELYNCAKEAMEACPVSAITIEEA |
8 | 6nbqI | 0.17 | 0.17 | 5.62 | 1.14 | HHsearch | | SERFRGRIHFEFDKCIACEVCVRVCPNLPVVDWLKHYSIDFGVCIFCANCVEYCPTNCLSVTE- |
9 | 4id8A | 0.15 | 0.14 | 4.72 | 0.87 | PROSPECTOR2 | | L-----TIHVDQDKCQGHARCKALAPELFDLDDYGNGVVPADLIDKAWLAKSNCPENAIDITED |
10 | 3gyxB | 0.19 | 0.16 | 5.06 | 0.70 | SAM | | -------TYVDPSKCDGCKACMYICPDLMILDPEKAFNQEPEACWECYSCIKICPQGAITA--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|