Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EQAKKVMDSLDGNFVTKTRFNEVNEENKTLKQSVADRDKQLDDLKKSSGDNAELKKQIETLQQQNADQKKTHDAEMALLKLDNAVDAALTAAGAKNAKAVKALLDISKVKLGEDGKLSGWEEQLSSVQKSDSYLFEAKQNQPV |
1 | 2tmaA1 | 0.10 | 0.09 | 3.36 | 1.05 | FFAS-3D | | QAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKH-------------- |
2 | 3na7A1 | 0.09 | 0.08 | 2.90 | 1.02 | Neff-PPAS | | ----------------EPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIRELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL--------- |
3 | 5eqzA | 0.16 | 0.13 | 4.41 | 0.87 | SPARKS-K | | KEIDSLMEDVLANDSSGGKFKDYKDKINELKENLAELKEKLLNLQNSFQDLAAKLAALKAAKNTIENITDKDQD-----ISKRKIWSEAKLVGVT-------------VPLLGSNT-SGSKNAVEQIDKVIKFLEE------- |
4 | 3na7A1 | 0.07 | 0.05 | 2.01 | 1.04 | FFAS-3D | | NDKEAKNKAILN---LEEEKLALKLQVSKNEQTLQDTNAKIASIQKKERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKE---------------------------MLELEKLALE-------------- |
5 | 6ianA | 0.18 | 0.16 | 5.22 | 0.37 | HHpred | | -QEELIVKGGS-VLQLQQRNKALTDEAAKLKGTLADINLALEKSTT--QDPSSVKDQATKLNQVNGEKRKQVDQLFLNAKETQNLDRRILAENQD-FGLYKATR-DEAFNVSD--AVLSHQHQIR-LTAKQELL--------- |
6 | 3na7A | 0.09 | 0.08 | 3.22 | 0.90 | MUSTER | | DKALNDKEAKNKAILLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKE----MLELEKLALELESLVEN--EVKNIKETQQIIFKKKEDLVEKTEPKIY |
7 | 2nrjA | 0.17 | 0.15 | 4.83 | 0.61 | CNFpred | | KNARAHAVTWDT---VKKQLLDTLNGIVEYDTTFDNYYETMVEAINT-GDGETLKEGITDLRGEIQQNQKYAQQLIELTKLRDSIGHDVRAFG-SNKELLQSILKNQ------GADVDADQKRLEEVLGSVNYY--------- |
8 | 3q0xA | 0.16 | 0.07 | 2.31 | 0.44 | HHsearch-2 | | SVVKQFLA---------FRLSEVKGTCHDLSDDLSRTRDDRDSMVAQ---LAQCRQQLAQLREQYDKHLLEVQ---------------------------------------------------------------------- |
9 | 5goxA | 0.11 | 0.10 | 3.81 | 0.92 | Neff-PPAS | | ---KEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFGSQDFESDLDRLKEEIEKSSKQRALAGATAVYSQFITQLTDENQSTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDELGLVPRQSII |
10 | 6f1tX2 | 0.13 | 0.11 | 3.88 | 0.74 | HHsearch | | --------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEEQGTVEELQDRVLILERQGHDKDLQLHQELQEVRLSRQLQGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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