>PF06762 (463 residues) LYFQWDNLLLETGFLCILVAPLTLIRGSRAVREHDSVTFWLIRWLLFRLMFASGVVKLTS RCPTWWGLTALTYHYETQCIPTPLAWFAHQLPVWWQKLSVVATFVIEIPVPFLFFSPLRR LRLAAFYMQLLLQVLIILSGNYNFFNLLTVTLCLSLLDDRHVNFWLRKADKSGDESNDSK LLLWLSRLVELLVWTLMIFGTIICFDLQVDSDKNTVSSRTAFTYHQFNQFLKTVTIPCIW IGVLSLTWELVASMFRCACISSSLKRFWGMIQWTMFGAAAVSMFAVSLVPFSFIEYESHS RLWPGVRQAYGLVDRYQLVNSYGLFRRMTGVGGRPEVVIEGSIDGNTWTEIEFMYKPGNV SASPPVVTPHQPRLDWQMWFAALGPQTQSPWFTSLMYRLLQGKREVIELIQTDVSKYPFH EEPPTYLRAHRYRYWFTEPKADGSFPERWWRRVYDEEFYPRVH |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LYFQWDNLLLETGFLCILVAPLTLIRGSRAVREHDSVTFWLIRWLLFRLMFASGVVKLTSRCPTWWGLTALTYHYETQCIPTPLAWFAHQLPVWWQKLSVVATFVIEIPVPFLFFSPLRRLRLAAFYMQLLLQVLIILSGNYNFFNLLTVTLCLSLLDDRHVNFWLRKADKSGDESNDSKLLLWLSRLVELLVWTLMIFGTIICFDLQVDSDKNTVSSRTAFTYHQFNQFLKTVTIPCIWIGVLSLTWELVASMFRCACISSSLKRFWGMIQWTMFGAAAVSMFAVSLVPFSFIEYESHSRLWPGVRQAYGLVDRYQLVNSYGLFRRMTGVGGRPEVVIEGSIDGNTWTEIEFMYKPGNVSASPPVVTPHQPRLDWQMWFAALGPQTQSPWFTSLMYRLLQGKREVIELIQTDVSKYPFHEEPPTYLRAHRYRYWFTEPKADGSFPERWWRRVYDEEFYPRVH | |||||||||||||||||||
1 | 6ftg5 | 0.10 | 0.09 | 3.23 | 1.00 | MUSTER | ELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKT-------GSIYWAAKCAL-----------AYFYMVSSWGGYVFLINLIPLHVLVLMLT------FSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDIEVASGMIAFFLITYTFHSTWVTSEAYSSPSIVLSARGG-------RIIFDDFREYYW--PEDAK-----VMSW----WDYGYQITAMANNTWNNTHISRVGQAMASTEKAYEIMRELDVS--IFGGLTGYSSDDINKFL-STDTGKHIKEHDYYT----GEFRVDRE | |||||||||||||
2 | 3rkoB | 0.11 | 0.08 | 3.06 | 1.40 | CNFpred | LSLTMLSVVTGVGFLIHMYASWYMR-----GEEGYSRFFAYTNLFIASMVVLVLADNLL----------LMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFLMWATLMLLGGAVGKSAQLPLQTWLADAMA------GPTPVSALIHAATMVTAGVYLIARTHGLFLM---------------TPEVLHLVGIVGAVTLLLAGFAALAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALVTAGFFSKDEILAGAMANGHINLMVA------GLVGAFMTSLYTFRMIFIVFHGK-AHAVKGVTHSLPLIVLL---ILSTFVG----------------------------------------------------- | |||||||||||||
3 | 6eznF | 0.09 | 0.08 | 3.16 | 1.51 | Neff-PPAS | --VTGGTLYPGLMTTSAFIWHALRNWLGLPIDIRNVCVLFAPLFSGVTAWATYEFTKEIKDASAGLLAAGFIAI---------VPGYISRSVAGSYDNEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMVRLMLTLTPVICVSAAVALSKIFDIYLDFKIALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIDDFRYYWLRMNSDEDSKVAAW----WDYGYQIGGMANTWNNTHIAIVGKAMASPEEKSYEILKEHD------------VDYVLVIFGGLIGFGGDDINKFLWMIRISEGIWPEEI | |||||||||||||
4 | 6eznF | 0.09 | 0.08 | 3.24 | 1.47 | PROSPECTOR2 | SCVLKLVIFVAIFGAAISSRLFAVIKFESIIHEFD----PWFNYRATKYLVNNSFYKFLNWDDRTWYPLGRVTGGTLYPGLMTTSAFIWHAPIDIRNVCVLFAPLFSGVTAWATYEFTKEIASAGLLAAGFIAIVPGYISRSVTLLMVTFMFWIKAQKTGVFLLILMGRYSMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDTHFLMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRLPSQTKLALIDDFREAYYWLRMGYQIGGMADRTTLVDNNTWNNYVLVIFGGLIGFGGDDIGIWPEEIKERDFYTAEGEYRVD---------ARASETMRNSLLYKMSLFNGGQATDRVRQQMITPLDVPPLDYFD-EVFTYQLKKDDAQGRTRSSTKTRRSIKRPELGLR | |||||||||||||
5 | 3wajA1 | 0.07 | 0.06 | 2.64 | 0.91 | SPARKS-K | --SVLVIAALISVKLRILNPWNSVFTWTVRLGGNDPWYYYRLIENTIHN-----------FPHRIWFDPFTYYPYGSYTHFGPFLVYLGSIAGIIRAVLAFIPAIGGVLAILPVYLLTREVAVIAAFLIAIVPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIAGITIGLYVLSIAPIILAFMFFAFVLAGFVNADRKNVVTFAVSALIYLPFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERNAVLHFGALFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIALWGQNRFAYYFAAVSAVYSALALSVVFDKLHFRVAFALLIALAAIYPTYILADAQSSYAGGPNKQWYDALTWMRENTPDGEKYDEYYLQLYPTPQSNKEPFSYPFETYGVISWWDYGHWIEAVAHRMPIANPFQA------------ | |||||||||||||
6 | 3rceA | 0.10 | 0.08 | 3.12 | 0.82 | FFAS-3D | LPFSFESIIL---YMSTFFA---------------SLIVVPIILIAREYKLTYGFIAAL--------LGSIANSYYNRTMSGYPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHEKIFYLAIALMIIALSMLAWQYKLALI------------VLLFAIFAYMIWALIFISISILHLSGGAFMYFNVNETIMEVNTIDPEVFMQRISSSVLVFILSFIGFILLCSMLLALPMLALGFMALRAGLRFTIYAVPVMALGFGYFLYAFFNFLEKKQIKLSLRNKNILLILIAFFSISYEASILNDLKNKAQREDYVV-------AWWDYGY---------PIRYYSDVKTLIDGDNFFSSF-VLSKEQIPAANMARLSTSAKDFLESLNDKNFKFDTNKTRDVYIYMPYRNTNPDNGEQEKSL------------------ | |||||||||||||
7 | 2w1uB | 0.17 | 0.03 | 1.07 | 0.32 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKLDGIRFVIGKNGG-GSSD--KWNKFKLEYSLDNESWTTIKEYDKTGAPA--------------------------GK-------------D------VI----EESFEPISAKYIRLTN-----ME------NINKWLTFSEFAIVSDELE | |||||||||||||
8 | 5ezmA | 0.11 | 0.08 | 3.06 | 0.95 | MUSTER | HFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARR-MGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLHL------VP-WFYLVSVRNPEFPNFFFYFLPLVIGGFLPWAGIFPKFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRL-----------SPRSWGKQLIGMAIVAACGLLASPVVATLN------------ANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRG----------VLPSVAVYAMGMYLGFTVALLGHETVGRP-----ASGADIAPQIAQKLTP----------------EMP--LYGVQMLDHT----LPF-------LRHPLMMVGQA----DELTFGATVEPQRVVPDVDSFTKLWKNGQPAMAVMSPDTYLA-LAPTLSMYVVARDWRRVV-VASLAGPQ------------------ | |||||||||||||
9 | 5xtcl | 0.09 | 0.06 | 2.32 | 1.31 | CNFpred | FSMMFIPVALFVTWSIMEFSLWYMN----SDPNINQFFKYLLIFLITMLILVTANNLF-----------QLFIGWEGV---GIMSFLLISAAIQAILYNRIGDIGFILALAWFILHS-SLTPLLGLLLAAAGKSAPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHP------LAENNPLIQTLTLCLGAITTLFAAVCALTQ-------------------------NDIKKIVAFSTSSQLGLMMVTIGIN-----QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNN---------EQDIRKMGGLLKTMPLTSTSLTIG---------SLALAGM---------------------PFLTGF---YSKDHIIETANMSY-TNAWALSITLIATSLTSAYSTRMILLT------------------------------------------------- | |||||||||||||
10 | 5tj5A | 0.17 | 0.09 | 2.84 | 0.59 | HHsearch-2 | IMFGHGFLMTLAALSLVLNEKKIN-----K-MKRGEIMAFTGRYIIL----LMGVFSMYTGNGTENALLFSNSY--------------------KMKLSILMGFIHSYFFSLGNFIP-----------GLLFMQGI--------FGYLSVCIVYWAVDWVKDGKPAPGFLSPGTDELYPH-QAKVQFLLLMALVCIPLLVKPLHFKF---------DI----MIHQV-------------IHTIEFCLNCVS-------HTASYLRLWALSAMWFALTCAVLVLGTSAMLHSL-------R-LHWVESMSKPYEPFA-------FEYKDM-----EV------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |