Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSTCPRSQLINSIDILRARRATGLMTRDNYRTV |
1 | 1ba2A1 | 0.10 | 0.10 | 3.62 | 0.74 | SPARKS-K | | ---KDTIALVVSTLNNPFFVSLKDGAQKEADKLYNLVVLDSQNNELANVQDLTVRGTAVGNAVKMANQAIPVITLDRQ-ATKGEVVSHILPDQIGAKGVETADKVLKGEKVQ |
2 | 4hffB | 0.15 | 0.12 | 4.21 | 0.58 | FFAS-3D | | ---------EALTTQYSQSELLKNWLSHCLALVY----KDDVVKNDATASAYLEYGVEIYHEIDEIAKKY----SGLKYNGSISSDFNTKCIDFIHDRELNELIKRRVEK-- |
3 | 6e3aA | 0.16 | 0.13 | 4.46 | 0.27 | HHpred | | ---------------LIDYSKLSKEVAYALRHEYGLELDAEGWVDINQLLSSLHEKVSE-HDLHVMIEKSDKIRALY-GHSKEQKCPVLTARRFVKSIKEKGLQPQGR-QYV |
4 | 2l9fA | 0.16 | 0.13 | 4.45 | 0.75 | MUSTER | | MARADDTALPAATG-------ALELVRHLVAERAELPVEDSRFLD--------DLHMSVGQLVNEAARAMG-LSAVAMPTNFATAT---EMAEALEAREREAPHLEHHHHHH |
5 | 3c1mA | 0.10 | 0.08 | 2.96 | 0.48 | CNFpred | | ------------------IAKVGDFIKFIREKHYKAI--EEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYL----GELTPKSRDYILSFGERLSSPILSGAIRDLGEKSI |
6 | 3a1iA1 | 0.22 | 0.11 | 3.38 | 0.33 | HHsearch-2 | | -----------ATIRPDD-KAIDA-----AARHYGITLDK---TARLEWPALIDGALGSYDVVDQLYADEATPPT------------------------------------- |
7 | 1ba2A1 | 0.12 | 0.11 | 3.79 | 0.64 | Neff-PPAS | | -----------TLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNKELANVQDLTVRGTAVGNAVKMANQAIPVITLDRQ-ATKGEVVSHILPDQIGAKGVETADKVLKGEKVQ |
8 | 2jvwA | 0.26 | 0.15 | 4.69 | 0.58 | HHsearch | | -----------------------------------MALIMTQQNNP-------LHGITLQKLLTELVEHYGWEMVNINCFK---KDPSIKSLKFLRARERVELKRHKERNQ- |
9 | 2l9fA | 0.12 | 0.10 | 3.50 | 0.78 | SP3 | | ------MARADDTALPAATGALELVRHLVAERA-ELPVEDSRFLD--------DLHMSVGQLVNEAARAMG-LSAVAMPTNFATAT-VREMAEALEAREREAPHLEHHHHHH |
10 | 2l9fA | 0.16 | 0.13 | 4.46 | 0.53 | PROSPECTOR2 | | MARADDTALPAATG-------ALELVRHLVAERAELPVEDSRFLDD--------LHMTVGQLVNEAARAMG---LSAVAMPTNFATATVREAEALEAREREAPHLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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