Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FFEKLRAFAKYVCPIKRKDQVDYDRDMKAKAGGLFQVISSFAIGKIKKEIQEDKMEVINTFKFMRFLATKIVGSRKKEESEESMKLTAEQQKEIKEGILRWETIITRITNTMVSSTTNSASSNEESSVG |
1 | 5cwoA1 | 0.12 | 0.10 | 3.54 | 0.80 | SPARKS-K | | WIRRAKEVAKEVEKVAQRAEEEGNPDLRDSAKELRRAVEEAIEEAKKQGNPELVEWVARAAKVAAEVIKVAIQAEKEGNR-----------DLFRAALELVRAVIEAIEEAVKQGNP------------ |
2 | 2wwvA | 0.11 | 0.09 | 3.09 | 0.88 | FFAS-3D | | --EELEEVVM-----------GLIINSGQARSLAYAALKQAKQGD-FAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVEAQLHLMTSMLA-RELITELIELHEKLKA------------ |
3 | 4clvA | 0.12 | 0.09 | 3.02 | 0.22 | HHpred | | ----LHEMLHDAVPLDSNILELKEEEFTARRREIESRLRESAKNPQSPEVEEATREVERAAADLQRATLVHVFEMR-------AGLKPEHRAAYDRVLVDALK-------------------------- |
4 | 5xuaA | 0.10 | 0.09 | 3.47 | 0.90 | MUSTER | | VSVAVARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQIEPLITQPAEREILDKIMQVRKTYIASRDKVSQLKADGMAEEAE---STLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVEQIE-- |
5 | 2l10A | 0.12 | 0.11 | 3.85 | 0.59 | CNFpred | | ALRAVGDASKRLLPPSTGTFQEAQSRLNEAAAGLNQAATELVQASTPQDLARASGRFGQDFSTFLEAGVEMAGQAPS----------QEDRAQVVSNLKGISMSSSKLLLAAKALSTDPASPNLKSQLA |
6 | 2pffB | 0.11 | 0.10 | 3.64 | 0.92 | HHsearch-2 | | GVIQLAHYVVTAKLLGF-TPGELRSYLKGHSQGLVT-AVAIAETDSWESFFVSVRKAITVLFFIPSILEDSL-ENNEGVPSPMSNLTQEQVQDYVNK-------TNSHLPAGKQVEISLVNGAKNLVVG |
7 | 5xuaA | 0.09 | 0.09 | 3.26 | 1.08 | Neff-PPAS | | VSVAVARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQIEPLITQPAEREILDKIMQVRKTYIASRDKVSQLKADGMAEEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVEQIE----- |
8 | 3itfA | 0.08 | 0.06 | 2.42 | 0.50 | HHsearch | | HFDGISHQRQQ-RDL-----QQARHEQPPVNVSELETHRLVTAENF---DENAVRAQAEK-ANEQIARQVEA-KV---RNQ-YRLLTPEQQAVLNEKHQQR-EQLRDV-------TQWQ---------- |
9 | 2x0cA1 | 0.10 | 0.09 | 3.19 | 0.69 | SP3 | | QFARANQAIQMACQSLGEPGCT-QAQVLSAATIVAKHTSALCNSSARTANPTAKRQFVQSAKEVANSTANLVKTIKALDGDF----TEENRAQCRAATAPLLEAVDNLSAFASNPEFSS---------- |
10 | 1w9rA | 0.13 | 0.12 | 4.27 | 0.67 | PROSPECTOR2 | | GSHMPEKKVAEA--------EKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEP--RNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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