Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | VCLLAGKMMMQNGGETYRVEDTMMRIAAAYGMKDSQSFVTPTGILFALDGSSPTTRLIRISERSTDLNKVTLVNDISRRITRGELTPDEAHRLLKQAEAAPAAYPPWLQIVLAALASGCFLLMFQGRMADFIPAVLAGGLGFAALIWFHRLVPIKLFAELVASVVVGMLSVLLVQAGLGQELDRIIIGSVMPLVPGLLLTNAVRDLIAGHLVSGLSKGAEAFLTAFAIGTGVAFVLSV |
1 | 6ei3A | 0.08 | 0.08 | 3.27 | 0.80 | SPARKS-K | | LMFIATAVFWLGRKRYVRVPLPPKDPHGFGAVVRSALLAHAPGQGRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDVRALLRVLVIFALVTPFFSLFDQWFTASQMQALNPLLVMLLIPFNNLVLRRMTSGIAFSGVAWIAVGAIQVAMDEPMHIAWQILPYALLTFGEVLVSATGIEFAYSQAMKGVVMSFWYLTTTVGNLWVLLSNVAV |
2 | 2pl2A | 0.14 | 0.11 | 3.71 | 1.01 | FFAS-3D | | --LRLGVQLYALG----RYDAALTLFERALKEN------------------------------PQDPEALYWLARTQLK----LGLVNPALENGKTLVARTPRY----LGGYMVLSEAYVALYRQAEDRERGKGYLEQALS-VLKDAERVNPRYAPLHLQRGLVY---------ALLGERDKAEASLKQALALEDTPEIRSALAELYMGRLDEALAQYAKALEQDLRVRYASALLL-- |
3 | 6iu3A | 0.10 | 0.05 | 1.87 | 0.31 | HHpred | | -------------------------------------------------------------QEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQDKRALQSAFTIAIAYVLGGYMFIPVRKAVVASVILTLMALLIFGYKGYFTDNSALQTALIGAIASAAAFGMAKA-VQSENL------------------------------------------------------- |
4 | 5cwqA | 0.12 | 0.10 | 3.58 | 0.75 | MUSTER | | EARKRSEEARERGDLKELAEALIEEARAVQEL------------------------ARVACERGN----SEEAERASEKAQR---VLEEARKVSEEAREQGDDLALALIAIALAVLALAEVACCRGNERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRV--EEEARKVKESAEESEVKRLAEEAEQLAREARRHVQECRGGWL |
5 | 5gpjA | 0.13 | 0.11 | 3.96 | 0.96 | CNFpred | | VSFLLGGVTSLVSLGMKIATYANARTTLEAGVGKAFITAFRSGAVMGFL---------------LAANGLLVLYIAINLFKIYGDDWGGLFEAITGYG-----LGGSSMALFGRVGGGIYTKAADVGA-PRNPAVIADNVGDNVGDIAGM--GSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATD-EIEPALKKQLVISTVLMTIGVAVVSFVAL |
6 | 5a43A | 0.15 | 0.07 | 2.26 | 0.46 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------------------------IKSLFAVIIGGSVGCTLRWLLSTKPPGTLVVNLLAGLIIGT-LAYFLRQ-PHLDPFWKL--ITTGLCGGLSFSVEVFALQAGNYIWALTSVLVHVIGSLITALGFFIITIL |
7 | 5cwqA | 0.08 | 0.08 | 2.99 | 0.78 | Neff-PPAS | | ------EELERESEEAERRLQEARKRSEEARERGD----LKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEE---ARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEARQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRG |
8 | 2pp4A | 0.15 | 0.06 | 2.13 | 0.54 | HHsearch | | ------------------GARQLSKL------------------------KRFLTTLQQY-GNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFP-LRPFVIPFLKANLPLLQCARLAKQNPAQYLAQ-----------HE--QLLLDAS-----------------------TTS-------------------------------------------------------- |
9 | 3pl5A | 0.12 | 0.06 | 2.09 | 0.88 | SP3 | | YLAMLAAQAREEGKSLKETKELILDVGPR-----LRTFFLVDKPLLWLDASGKLVPIAKLR------GRKKGMKEMLKRATADVADSEAAENLKEQLLANEKIKNVVTLPLGPVISTHVLAVFTIGKEAR------------------------------------------------------------------------------------------------------------ |
10 | 5cwqA | 0.11 | 0.10 | 3.48 | 0.80 | PROSPECTOR2 | | EARKRSEEARERGDLKELAEALIEEARAVQ-------------------------ELARVACERGNSEEAERASEKAQRV------LEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVARGNSEEAERASVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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