Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | KCDEIIVLHLGYLNYTQYQINISFHNLSDLKYKIKEVNFTWKMYNSSFSQVEIWFRFVFVVLTFMVTCLFAHSLRKFSMRDWGIEQKWMSILLPLLLLYNDPFFPLSFLVNSWFPGMLDDLFQSLFLCALLLFWLCVYHGIRVQGERKCLTFYMPKLFIVGLLWLSAVTLGIWQTVNELHDPTYQYKVDTGNFQGMKIFFVVVAALYILYLVFLIVRACSELKNMPYVDLRLKFLTALTFVILIISIVILYLRFGSKVLQDNFVAELSTHYQNSAEFLSFYGLLNFYLYTLAFVYSPSK |
1 | 5wb1A1 | 0.08 | 0.07 | 2.85 | 1.41 | SPARKS-K | | -------------------------------------PCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITW-RRRIQCSGDVYFINLAAADLLFVLPLWMQYLLLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRP--VKQACLFSIFWWIFAVIIAIPHFMVVTKKQCMTDYVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSCEFERSLKRALILTESLAFCHCCLNPLLYVFVG |
2 | 5ee7A1 | 0.10 | 0.07 | 2.74 | 1.48 | FFAS-3D | | -----------------------------------------------YSSFQVMYTVSLSLAALLLALAILGGLSKLH----CTANAIHANLFLSFVLKASAVLFIDGLLRTVACRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLRSFFSLYL----GIGWGAPALFVVPWAVVKCLFENVQCWTNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHTDYAFRLAKSTLTLIPLLGVHFVVFAF--------------VTDEHRSAKLFFDLALSLLVAVLYCF----- |
3 | 3rkoB | 0.10 | 0.09 | 3.19 | 1.39 | CNFpred | | -------------------------------------NIGFNLVL---DGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWELCSYLLIGAMKAFVVTRVGDVFLAFALFILYNE----LGTLNFREMV-MLMWATLMLLGGAVGKSAQL---PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC |
4 | 5t1aA1 | 0.11 | 0.09 | 3.29 | 1.23 | Neff-PPAS | | --------------------------------------------KQIGAQLLPPLYSLVFIFGFVGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANETGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTKQKEDSVYVCGPYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGISRASREKKAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTHCCINPIIYAFVGEK |
5 | 5wb1A1 | 0.10 | 0.09 | 3.20 | 1.13 | PROSPECTOR2 | | PCV--------------------------------------------FTDVLNQSKPVTLFLYGVVFLFLVIFTITWRRRIQCSGDVYFINLAAALFVCTLPLWMQYLLDHNSLTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYRISRIVAVSQSRHKG-RIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLLVPRG |
6 | 6me6A2 | 0.10 | 0.09 | 3.21 | 1.39 | SPARKS-K | | ----------------------------------------DGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDGWHCKASAFVMGLSVIGSVWNITAIAIDRYLYIHRIYRRWHTPLHICLIWLLTVVALLPNFFVSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARLKPSDLRSFLTMFVVFVIFAICFAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNVYGLLDQNFRREYK |
7 | 4or2A2 | 0.14 | 0.10 | 3.56 | 1.42 | FFAS-3D | | --------------------------------------------SNIESIIAIAFSCLGILVTLFVTLIFVLVVKSSS-------RELCYIILAGIFLG---YVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYF---------------GSNYKIITTCFAVSLSVTV-ALGCMFTP-- |
8 | 4he8F | 0.12 | 0.10 | 3.45 | 1.32 | CNFpred | | -------------------------------------PFSLLLD-----NLSGFMLLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGARKAFIVNRIGDLGFMLGMAILW---YGTLSISELK-LLALAGLLLFLGAVGKSAQI---PLMVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAL |
9 | 4xt1A | 0.09 | 0.08 | 2.97 | 1.16 | Neff-PPAS | | ---------------------------DEDATPCV----FTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDSVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTK |
10 | 3dqbA | 0.06 | 0.06 | 2.58 | 1.11 | PROSPECTOR2 | | -------------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVAFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYMVTTLCCGKN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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