Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MVLVASFVGHAQIIRGETKEDNDTKSMTMTTMRPGSYVTSMDEKSSLCFEDIKTLWYICRTTYHLYRTLKDCLSHC |
1 | 4bqdA | 0.13 | 0.12 | 4.08 | 0.83 | SPARKS-K | | ---------SEEDEEHTIITDTELPPLKLMHSAFKADDGPCKAIMKRFFFNIFTRIYGCEGNQNRFESLEECKKMC |
2 | 4bqdA | 0.13 | 0.11 | 3.64 | 0.38 | FFAS-3D | | --------------SEEDEEHTIITDTELPPLKLMHSFCAFKADDGPC-KAIMKRFFFNIFTRQCFESLEECKKMC |
3 | 2bbgA | 0.27 | 0.12 | 3.63 | 0.29 | HHpred | | -------------------------------------------DDGLCYEGTKVGKYCCSPIGKCYDSKAICNKNC |
4 | 1bikA1 | 0.18 | 0.12 | 3.87 | 0.95 | MUSTER | | ---------------------SCQLGYSAGPCMGMTSRYFYNGTSMACET----FQYGCMGNGNNFVTEKECLQTC |
5 | 5k6fF | 0.12 | 0.11 | 3.71 | 0.69 | CNFpred | | VLAYVVQLPLYGVI----------DTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNASVSFFPQAETCKVQS |
6 | 2ru1A | 0.11 | 0.08 | 2.84 | 0.89 | HHsearch-2 | | --------GPEKME-VKEIGRSSK------------IILP-ACMHETCSGGLKNDCWCCLRLARCWKEKEFCFANC |
7 | 1bikA1 | 0.15 | 0.11 | 3.53 | 1.21 | Neff-PPAS | | ---------------------SCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGG---CMGNGNNFVTEKECLQTC |
8 | 2ru1A | 0.09 | 0.07 | 2.47 | 0.92 | HHsearch | | --------GPEKME-VKEIGRSSK------------IILP-ACMHETCSGGLKNDCWCCLRLARCWKEKEFCFAN- |
9 | 1tocR2 | 0.18 | 0.13 | 4.30 | 0.82 | SP3 | | ---------------DHSSEMHSSLGDPPTSCAEGTDITYYDSDSKTCKVL----AASCPSGENTFESEVECQVAC |
10 | 3it8D2 | 0.12 | 0.12 | 4.17 | 0.42 | PROSPECTOR2 | | IMTLECTVIESEHFKGEYKYVNGRYYPEWGRKSNYE--PGEPGFPWNIKKDKDANTYSLSKMSSQPAQVYTCSEGC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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