>PF06622 (305 residues) MNLLNSQLNMKINDFYLPLLSVIGTGRLYITPEGHACHAYFREVSGNGIRFTLTCSGYEG RFWISEEQFIQWCHELFPYSESRLIPEDMIKLMILWVMQTALPEGDVSVDDVQFTMLNKD VYPVIENNNGENRLNVIILEITVQSLQYLINENWQFVPHSNTIFFDGYIAPGWTDYPVTE LTVGDSLRLYHVDDSKERECWLVINNPLATVKLCDNNLFIADVQAADLLCTISNEAVMDR IYCVIGTIHVDIHMLRNAKKDDIIDSTGYHLFGGCRLIRNNTTIAYGSIVKINEDFYFTV SLVCD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MNLLNSQLNMKINDFYLPLLSVIGTGRLYITPEGHACHAYFREVSGNGIRFTLTCSGYEGRFWISEEQFIQWCHELFPYSESRLIPEDMIKLMILWVMQTALPEGDVSVDDVQFTMLNKDVYPVIENNNGENRLNVIILEITVQSLQYLINENWQFVPHSNTIFFDGYIAPGWTDYPVTELTVGDSLRLYHVDDSKERECWLVINNPLATVKLCDNNLFIADVQAADLLCTISNEAVMDRIYCVIGTIHVDIHMLRNAKKDDIIDSTGYHLFGGCRLIRNNTTIAYGSIVKINEDFYFTVSLVCD | |||||||||||||||||||
1 | 4yxbA | 0.13 | 0.06 | 1.95 | 1.03 | SPARKS-K | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRLSQLKPGDVLPIEKPDR-----IIAHVDVPVLTSQYGTGQYALRVEHLINEAQDIDLIDIPVKLTVELGRTR-TIKELLRLTQGSVVALDGLAGEP-LDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
2 | 4yxbA | 0.15 | 0.07 | 2.21 | 1.52 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------------------LELVANFADIPLRLSKLKPGDVLPIEK----PDRIIAHVDGVPVLTSQYGTVNGQYALRVEHNEAQDIDLIDIPVKLTVELGRT-RTIKELLRLTQGSVVALDG-LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
3 | 4yxbA | 0.12 | 0.05 | 1.86 | 1.91 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRLSKLKPGDVLPIEKPDR-----IIAHVGVPVLTSQYGGQYALRVEHLINPIAQIDLI-DIPVKLTVELGRTR-TIKELLRLTQGSVVALDG-LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
4 | 4yxbA | 0.15 | 0.07 | 2.22 | 0.93 | MUSTER | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRILKLKPGDVLPIEKPDR----IIAHVDGVPVLTSQYGTVNALRVEHLINPILNDIDLIDIPVKLTVELGRTR-TIKELLRLTQGSVVALDGL-AGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
5 | 4yxbA | 0.12 | 0.05 | 1.86 | 1.41 | CNFpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRLLKLKPGDVLPIEKP-----DRIIAHVDVPVLTSQYGTQYALRVEHLINPILN-DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL-AGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
6 | 4yxbA | 0.13 | 0.06 | 1.94 | 2.67 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRLSKLKPGDVLPIEKPDR-----IIAHVDVPVLTSQYGVNGQLRVEHLINPAQDIDLI-DIPVKLTVELGRTR-TIKELLRLTQGSVVALDG-LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
7 | 4yxbA | 0.14 | 0.06 | 2.13 | 1.33 | Neff-PPAS | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRILKLKPGDVLPIEKP----DRIIAHVDGVPVLTSQYGTVNGQYALRVEHLINPILDLIDIPVKLTVELGRTR-TIKELLRLTQGSVVALDGLAGE-PLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
8 | 4yxbA | 0.12 | 0.05 | 1.85 | 3.52 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRLSKLKPGDVLPIEKPDR-----IIAHVGVPVLTSQYGNGQALRVEHLINPAQDIDLI-DIPVKLTVELGRTR-TIKELLRLTQGSVVALDG-LAGEPLDILINGYLIAQGEVVVVADKYGVRITDII- | |||||||||||||
9 | 4yxbA | 0.14 | 0.06 | 2.13 | 1.24 | PROSPECTOR2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ELELVANFADIPLRLSKLKPGDVLPIEKP----DRIIAHVDGVPVLTSQYGTVNALRVEHLINPEAQDIDLIDIPVKLTVELGRTR-TIKELLRLTQGSVVALDG-LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT | |||||||||||||
10 | 4yxbA | 0.13 | 0.06 | 1.93 | 1.35 | SAM | --------------------------------------------------------------------------------------------------------------------------------------------------------------------LELVANFADIPLRLSKLKPGDVLPIEKPDR----IIAHVDGVPVLTSQYGGQYALRVEHLINPAQDIDLI-DIPVKLTVELGRTR-TIKELLRLTQGSVVALDG-LAGEPLDILINGYLIAQGEVVVVADKYGVRITD--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |