Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKNNLREEKEVVFDGCMNVLSLPSGWKAITPKKNNATSEIIVFFIPPKASYHIILKYNKTKHCELFFSDHITGEQDIIYSQNAFFSHVINHIIALVDVLNKKSYASNVIKFLITMEGGGDILSESKRAP |
1 | 3nctA | 0.17 | 0.16 | 5.09 | 0.77 | SPARKS-K | | IRAAGSDERRELTHAVRE-LDAPDNWTGEYGSEFGGFFPVQVRFTPAHERFHLALCSDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYVNDIIHILAEGGQ------------ |
2 | 3nctA | 0.18 | 0.16 | 5.05 | 0.66 | FFAS-3D | | ------SDERRELTHAVRELDAPDNWNGEYGSEFGGFFPVQVRFTPAHERFHLALCSDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGG------------ |
3 | 3nctA | 0.19 | 0.16 | 5.26 | 0.37 | HHpred | | -----SDERRELTHAV-RELDAPDNWT-NGEYGSEFFFPVQVRFTPAHERFHLALCSPGDQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGGQ----------- |
4 | 3nctA | 0.22 | 0.19 | 6.13 | 0.77 | MUSTER | | LQTNAQEYEDIRAAGAVRELDAPDNWTNGYGSEFGGFFPVQVRFTPAHERFHLALCGDVSQVWVLVLVNA-GGEP-VVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGGQ----------- |
5 | 5o4pA | 0.17 | 0.14 | 4.60 | 0.65 | CNFpred | | -------VMRIINEPTAAAIAYGLDKRE-------GEKNILVFDLGGGAFDVSLLTIDN-GVFEVVATNGD-----THLGGEDFDQRVMEHFIKLYKKKTGK-DNRAVQKLRREVEKAKRALSSQHQAR |
6 | 3nctA | 0.19 | 0.17 | 5.50 | 0.64 | HHsearch-2 | | LQTDIRDERRELTHAV-RELDAPDNWT-NGEYGSGGFFPVQVRFTPAHERFHLALCSPGDQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGGQ----------- |
7 | 3nctA | 0.18 | 0.16 | 5.05 | 1.00 | Neff-PPAS | | ------SDERRELTHAVRELDAPDNWTNGYGSEFGGFFPVQVRFTPAHERFHLALCSDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGGQ----------- |
8 | 3nctA | 0.19 | 0.17 | 5.50 | 0.46 | HHsearch | | LQEDIRDERRELTHAV-RELDAPDNWT-NGEYGSEFFFPVQVRFTPAHERFHLALCSPGDQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGGQ----------- |
9 | 3nctA | 0.19 | 0.18 | 5.73 | 0.71 | SP3 | | LQTNAQEYEDIRAAGAVRELDAPDNWTNGYGSEFGGFFPVQVRFTPAHERFHLALCGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHILAEGGQ----------- |
10 | 2arca | 0.10 | 0.10 | 3.68 | 0.49 | PROSPECTOR2 | | LLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGGREFVCLLFPPGEIHHYGRHPEAREWYHQWVYPSIFANTGFFRPDEAHQPHFSDLFGQIINAGGEGRYSELLAINLLEQ-----LLLRRMEAI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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