Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | KHDLTHARHDPAHCLAPGLFRSLKRGERKRGKLDVVYDYGDGKRIEFSGPEPLGADDLRILQGLVAMAGPGGLVLSPEPQTEAGQQLRLFLEPKWEAVQQDAMVVKGSYRALAREIGYANPDDTKPVRECIERLWKVSIIAQNGRKRQGFRLLSEYASDEQDGKLYVALNPLIARAVMGGAQHVRIDMDEVRALQTDPARLMHQRLCGWIDPGKSGRVELDTLCGYAWPSKANENAMKRRRGIARKAIPELAALGWTVSEYAKNKFEIGRPK |
1 | 2nraC | 0.14 | 0.11 | 3.75 | 1.91 | SPARKS-K | | --------------------------------------VNKKTKIRHRTLAQLPLPAKRVMYMALALI---------DSKEP----------------LERGRVFKIRAEDLAALAKITPSLAYRQLKEGGKLLGASKISLRGDDIIADLNIIEWIAYSPDEGYLSLKFTRTIEPYISSLIGFTTQLLTASLRLSSQYSSSLYQLIRKHYSNFKYFIISVDELKEELIADKKYPDFPIFKRDVLNKAIAEIKKKTVGFTVHEKEKFEFVVDE |
2 | 2nraC | 0.13 | 0.10 | 3.44 | 1.79 | FFAS-3D | | ---------------------------------------NKKTKIRHRTLAQLPLPAKRVMYMALALIDSKEPLERGRV-------------------------FKIRAEDLAALAKITPSLAYRQLKEGGKLLGASKISLRGDDIIADLNIIEWIAYSPDEGYLSLKFTRTIEPYISSKNKFTTQLLTASLRLSSQYSSSLYQLIRKHYSNFKKKIISVDELKEELIIEYKYPDFPIFKRDVLNKAIAEIKKKTGFTVHEKEGKFEFVVDE |
3 | 2nraC | 0.14 | 0.11 | 3.66 | 2.25 | HHpred | | ------------------------------NKKTKIRHRNELN----HTLAQLPLPAKRVMYMALALIDSKEP-------------------------LERGRVFKIRAEDLAALAKITPSLAYRQLKEGGKLLGASKISLRGDDEELDLNIIEWIAYSPDEGYLSLKFTRTIEPYISSLIKFTTQLLTASLRLSSQYSSSLYQLIRKHYSNFKYFIISVDELKEELIAYYKYPDFPIFKRDVLNKAIAEIKKTEISVGFTVEGKFEFVVDE |
4 | 2z9oA | 0.15 | 0.11 | 3.61 | 1.43 | MUSTER | | -----------------------------------------SNDL-TEAAYSLSRDQKRMLYLFVDQIRDG--------------------------------ICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRPMRLSYIEKKVFSFRDIT |
5 | 1repC | 0.15 | 0.11 | 3.70 | 1.60 | CNFpred | | -----------------------------------------SPRIVQSND-SLSRDQKRMLYLFVDQIRKS-----------------------------HDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFY-----ESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLNRFTQFRLSETKEITNPYAMRLYESLCQYRKPSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRPMRLSYIEKTHIVFSFRD |
6 | 2z9oA | 0.14 | 0.10 | 3.50 | 2.68 | HHsearch-2 | | -----------------------------------------SNDLTE-AAYSLSRDQKRMLYLFVDQIR-D-------------------------------GICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQRFTQFRLSETKEITNPYAMRLYESLCQYRKSG-IVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSTPMRLSYIKKGRFSFRDIT |
7 | 2z9oA | 0.15 | 0.10 | 3.47 | 1.67 | Neff-PPAS | | ---------------------------------------------------SLSRDQKRMLYLFVDQIRD--------------------------------GICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGQNRFTQFRLSETKEITNPYAMRLYESLCQYRDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTLSYIEKKKGVFSFRDIT |
8 | 2z9oA | 0.14 | 0.10 | 3.40 | 4.30 | HHsearch | | -----------------------------------------SNDL-TEAAYSLSRDQKRMLYLFVDQIR-D-------------------------------GICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQRFTQFRLSETKEITNPYAMRLYESLCQYRKSG-IVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSTPMRLSYIKKGRQTTHDI- |
9 | 1repc | 0.15 | 0.11 | 3.70 | 2.02 | PROSPECTOR2 | | SP-----------------------------------------RIVQEAAYSLSRDQKRMLYLFVDQIRKS-----------------------------HDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYE-----SFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSTPMRLSYIEKKVFSFRDIT |
10 | 2nraC | 0.13 | 0.09 | 3.07 | 2.12 | SAM | | ----------------------------------------------NHTLAQLPLPAKRVMYMALALIDSK---------------------------LERGRVFKIRAEDLAALAKITPSLAYRQLKEGGKLLGASKISLRGDDEELDLNIIEWIAYSPDEGYLSLKFTRTIEPYISSLIKFTTQLLTASLRLSSQYSSSLYQLIRKHYSNF-YFIISVDELKEELIAYYKYPDFPIFKRDVLNKAIAEIKKTEISVGF------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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