Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VPTGPGFENIADANRVCSTVGAVPGNNIVNGTNYLRLAYAYENANKWRNLGILIAFAVGFLVIYICLTEFNKGAMQKGEIVLFLKSSLKNH |
1 | 5nj3A | 0.19 | 0.15 | 4.97 | 1.56 | HHsearch-2 | | IASWLRYTAQHNEFFCPGLNATNPCNYTCTGEEYLV-KQGIDLSGLWKNHVALACMIVIFLTIAYLKLLFLKKYS---------------- |
2 | 5nj3A | 0.23 | 0.18 | 5.53 | 1.78 | HHsearch | | IASWNEFLGQ---NFCPGLNATNPCNYTCTGEEYLV-KQGIDLSGLWKNHVALACMIVIFLTIAYLKLLFLKKYS---------------- |
3 | 4bj1A2 | 0.06 | 0.05 | 2.38 | 0.81 | SPARKS-K | | NYLSLTCAQEQEYLKKMIKFTFDSGSKLLSYNSLVTCQLNNKESNLAIFFEFLKVFTYLFNAYTEIIVQKIRNRLTIKNYPH--------- |
4 | 5do7B2 | 0.19 | 0.12 | 3.90 | 0.59 | FFAS-3D | | -------------------MPLGNLTIAVSGDKILSV-MELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQKPSQD------------- |
5 | 5do7B | 0.17 | 0.12 | 3.99 | 0.53 | HHpred | | --------QFSRRTYKMPL---GNLTIAVSGDKILS-VMELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQKPSQD------------- |
6 | 5nj3A | 0.19 | 0.15 | 4.98 | 0.77 | MUSTER | | IASWLSFLGQNFCPGLNATGNNPCNYATCTGEEYLVKQIDLSPWGLWKNHVALACMIVIFLTIAYLKLLFLKKYS---------------- |
7 | 3rkoC | 0.09 | 0.04 | 1.69 | 0.68 | CNFpred | | ----------------------------VSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER----------------- |
8 | 5do7B | 0.17 | 0.13 | 4.35 | 1.24 | HHsearch-2 | | AWKCIQFSRR---TYKMP---LGNLTIAVSGDKILS-VMELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQKPSQDW------------ |
9 | 5do7A2 | 0.12 | 0.08 | 2.70 | 0.89 | Neff-PPAS | | -------------------YGLNFTCAFTQGIQFIEKTCPGATSRFTMNFLILYSFIPALVILGIVVFKIRDHLIS--------------- |
10 | 5do7B | 0.17 | 0.13 | 4.35 | 1.66 | HHsearch | | AWWKIQFS---RRTYKMP---LGNLTIAVSGDKILS-VMELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQKPSQDW------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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