Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LLLCLLCTRGQAARPTPGSSHQQSQGAGSATSHEKSAAGTGMEMEQVDQEAMRGCEGGEGAEECLMRRTLVAHTDYIYTQGKHN |
1 | 5yfpE6 | 0.06 | 0.05 | 2.13 | 1.07 | SPARKS-K | | ---TVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPAAHLYILEILKIMLGIVDSYMEIA----------LEVAYWKICKV |
2 | 4lu2A | 0.08 | 0.07 | 2.87 | 1.03 | MUSTER | | NAYLLKLDCEAGRVDPVEYDDISDEEIYEITVDVGVSSEDQEKVAKIIRECIAQVSTQDEIYDCYMKKKICNYY----PENMH- |
3 | 1zvoC2 | 0.14 | 0.07 | 2.43 | 1.02 | SP3 | | -----------------GSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPEC------------------------- |
4 | 3hgfC | 0.09 | 0.08 | 3.15 | 1.03 | SPARKS-K | | --------KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKSEKIKKKSENMIKSMEKYIKDLDEIKEQSP |
5 | 5z1fA1 | 0.06 | 0.06 | 2.54 | 0.29 | FFAS-3D | | -IFVILMLLFTWLSRKSGNAPNRILKGLEPWEGTSLTRNPFAWMREALTSSEQDVVNLSGVDTAVHFVFLSTVLGIFAC----- |
6 | 5yz4A | 0.15 | 0.10 | 3.23 | 0.26 | HHpred | | ---------------------------SDCVMAELEKLGIALRAKRFERLPCTHK--GTYADDCIVQRVMQHKCYLVATNDKNL |
7 | 2kubA | 0.15 | 0.14 | 4.79 | 0.95 | MUSTER | | NLDKMISEAEVLN--DMAARKLITLDAEQQLELMKSLVATQSQLEATKNLI--GDPNATVADLQIAYTTLGNNTQAL-ELIKL- |
8 | 3p0bA | 0.14 | 0.07 | 2.44 | 0.57 | CNFpred | | FALVLHAHLPYVRAHG-----------------------------------------WPFGEETLYEAMAETYLPLIRVLERLR |
9 | 1vt4I3 | 0.12 | 0.12 | 4.17 | 0.74 | HHsearch-2 | | MVFLDFRFLEQKIRHDSTAWNASGSILNTYICDPKYERLVNAILDLPKIEENLIC----SKYTDLLRIALMAEDEAIFEEAHKQ |
10 | 5uf5A3 | 0.08 | 0.07 | 2.86 | 0.99 | Neff-PPAS | | QYHLFKGYVKDQPEESPFEGILPAEDQKILVKTMIDYAMPKLSSKVLQDKLSALSSSD------VLTKTLLDSIDRIVKENEKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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