>PF06213 (272 residues) EAPAEPFKRSVAGCLRAIAKTPELEVTFASDRPALTGERARLAEPPRKMSAADAAIVRGQ ADSMALRLACHDAVVHRRLAPEGQQARAVFDAVEQSRVESIGSNRMAGVASNITAMLEDR YHRGAYHEVTDRADAPLEDAVAMIVRERLTGLKPPPAAQKIVDLWRPWVEEKAGKDLDKL ASNLEDQRHFARSVREMLASLDMAEDSSLDPEDSEEDEESNEQSQDKEQQEGESEEQSAA ERAEMERSEEATEEMEEGQSETSEGPTGEMPD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | EAPAEPFKRSVAGCLRAIAKTPELEVTFASDRPALTGERARLAEPPRKMSAADAAIVRGQADSMALRLACHDAVVHRRLAPEGQQARAVFDAVEQSRVESIGSNRMAGVASNITAMLEDRYHRGAYHEVTDRADAPLEDAVAMIVRERLTGLKPPPAAQKIVDLWRPWVEEKAGKDLDKLASNLEDQRHFARSVREMLASLDMAEDSSLDPEDSEEDEESNEQSQDKEQQEGESEEQSAAERAEMERSEEATEEMEEGQSETSEGPTGEMPD | |||||||||||||||||||
1 | 5cwpA | 0.15 | 0.11 | 3.74 | 0.91 | SPARKS-K | RELIERAKEAAERAQEAAERTGD------------------------PRVRELARELKRLAQEAAEEVKRD---------PSSSDVNEALKLIVEAIEAAVRALEAAELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNSEEVNEALKKIVKAIQEAVESLREAEESGD-------------------------PEKREKARERVREAVERAEEVQRDPSGWLE-------- | |||||||||||||
2 | 4cr2T | 0.09 | 0.08 | 2.91 | 0.92 | FFAS-3D | NGDYAACEKLLPPIKIELIKNNLLIPDLSIQND---------------IYLNDLMITKRILEVGAASIQTFNFDSFENY------FNQLKPYYFSKKSKLISLYLLNLLSQNNTTKFHSELQYLDKHIKNLEDDSLLSYPIKLDAWDLLQSGSQNISTDILKSAIRDEIAKNTELSLSNIKALL--FFNNEKETEKFALERNWPIVNSKVNNQSKEKADYEDEMMHEE----------DQKTNIIEKAMDYAISIEN--------------- | |||||||||||||
3 | 5c2kA | 0.11 | 0.08 | 2.81 | 0.27 | HHpred | -DSPDSLEEKWTPEVKHFCPNVPIILVGNKDLRNVEGAFGYME-CSA-KTKDGVREVFEMATRAALQARRGKEGMLADFVSIPSIVVHCVNEIEQRGLTETGLYRIDGCDRTVKELKEKFLRVKTVPLLSKDDIHAICSLLKDFLRN----LKEPLLT---FRLNRAFMEAAEIAAMYQAVQANRDTLAF--LMIHLQRVAQ-SPHTKM--------------------------------------------------------------- | |||||||||||||
4 | 5cwmA | 0.15 | 0.12 | 4.19 | 0.92 | MUSTER | -DPEDELKRVEKLVKEAEE---------------------LLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDP--EVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAAR-----------LAKRVLELAEKQ-----DPEVALRAVELVVRVAELLLRIAKES-EEALERALRVAEEAARLAKRV-LELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER------- | |||||||||||||
5 | 4iggA | 0.12 | 0.08 | 2.97 | 0.67 | CNFpred | KEYAQVFREHANKLIEVANLA----CSISNNEEGVK---------LVRMSASQLEALCPQVINAALALAAKSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDLAVSENHILEDVVIALQEKDVDGLDRTAIRGRAARVIHVVTSEMDNYEPTEKVLEATKLLSNTVMPRFTEQVEAAVEAL-DENEFIDASRLVYDGIR---------------------------------------------------------------------- | |||||||||||||
6 | 1vt4I3 | 0.12 | 0.08 | 2.85 | 0.61 | HHsearch-2 | ----------------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYL-DQYFYSHIGHHLKNIHPERMTLFRM--VFLDFRFLEQ-KIRHDSTANASGSILNTLQQLKFYKPY--IC--DNDP---KYERLVNA--------ILDFLPKIEENL-ICSKYTDLLRIAL----MAEDEAIFEEAH--KQVQRGGGGGGGGGGGGG-GGGGG---------G---GGGGGGGGGGGGGGGG | |||||||||||||
7 | 5nnvA | 0.11 | 0.09 | 3.31 | 0.95 | Neff-PPAS | ---------------------------------------------KEEELAESSAISAKEAKIEDTRDKIQADELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS---STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL | |||||||||||||
8 | 1vt4I3 | 0.10 | 0.07 | 2.69 | 1.18 | HHsearch | ----------------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYL-DQYFYSHIGHHLKNIHPERMTLFRM--VFLDFRFLEQK-IRHDSTAWASGSILNTLQQLKFYKPY--I--CDNDPKYERLVNAILDFLP--------KIEENLIC----SKYTDLLRIALM----AEDEAIFEEAH--KQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
9 | 4zemA | 0.13 | 0.07 | 2.56 | 0.69 | SP3 | ----------------------------------------------------------------------PSLATWTKSLRDQS----------------------------LEASIESLIFLLKRRQVTG---DECAGAIAQLLRQVVAKSKWHD---------VDQLLYRVQTAGARLARAAPHEPVIGNIVRRVLGLIRDEASDIASDAASDIQSKSMFNLLS-----VQPFSVHALRSEVMDGIEEILDEINQADDQIASFAEIQIHP | |||||||||||||
10 | 2yfaA | 0.09 | 0.07 | 2.76 | 0.87 | PROSPECTOR2 | GSHMGDIGQLNKDLTDLMIANGD---------------------------DTAAANTLAKLDAFYLATTFKSPENVKLLGELGDTISAYKLSLNKMRARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQRGYIAENSSANEQAALRQL-----DAALADTDNLKRQLPSEDARLQQFENAVLAY----------------------RDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLE-------R | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |