Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | APAVIPVGSTVAAAAQPPGYDPLRQSLSTLARIGATDRWIMTGTLVLLGLGYVAGALVLTRIPWPGRIAVGLGGAGTLFAGLLPQPETGSSPWHMGAATVGWIAFVGFPLAVSRHPSASPLLGRRAAWVVTGTLLALLGWFFVQLQTGGPYIGLSERVLIIAQTLWPAVVV |
1 | 5aymA2 | 0.11 | 0.11 | 3.99 | 1.17 | SPARKS-K | | FSDPIFWLILSYALLWLSVLSPHGVLLAAYLEMRL-PETEIGLFRGLGAVFGLISTVSFPYLVRRLRWHLGFQGVTLGIAVAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELRQRLIPELNSLSSLTTTSATLILFSAGSLLPQTEDFKYLVYVSLAAVLLANVVFIK |
2 | 4o6yA | 0.14 | 0.13 | 4.41 | 1.02 | FFAS-3D | | -PIFMVLGFIIAALVYRGGLALSKDHIFNV------HPVMMVIGLLFNGEAMLAYKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLACLFLFAFQWAFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTA----TTGILEKILILGGFVILGVVT |
3 | 3rkoB | 0.13 | 0.12 | 4.27 | 1.24 | CNFpred | | ATLMLLGGAVGKSAQLP-----LQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFTPEVLHLVGIVGAVTLLLAGFAALV---QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIGGLIPLVYLCFLVGGAALSA |
4 | 3o7pA2 | 0.09 | 0.09 | 3.51 | 1.15 | Neff-PPAS | | --IRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARF |
5 | 4o6yA | 0.12 | 0.12 | 4.09 | 1.12 | SPARKS-K | | VRVLGFIIAALVLTWTRGGLAL----------SSDNKDHIFNVHPVMMVIGLNGEAMLAYKSVLKKLVHLTLQLTAFILSLIGVWIENFYSL-HSWLGLACLFLFAFQWAAGFVTYWYPGFLGISIYALALVTATTGILEKVTFLQVNQVILVNTMGVLILILGGFVILGV |
6 | 5zleA | 0.11 | 0.11 | 3.78 | 1.01 | FFAS-3D | | --FLSVIFALVWVLHYREGLGWWHPVLMVTGFV-----FIQGIAIIVYRLPWTLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATA----LMGLTEKLGVFVNTLGLLILV |
7 | 1pw4A | 0.13 | 0.12 | 4.24 | 0.25 | HHpred | | --LGIFFGYAAYYLV-RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPFLPAGLILAAAVMLFMGFVPSSI-----AVMFVLLLGWMGWPPCGRTMVHWWSQKERGGI-VSVWHNVGGGLLFL-LGMAWFNDWHAALYMPAFCAIVALFAFA--- |
8 | 3wdoA | 0.11 | 0.11 | 4.00 | 0.90 | MUSTER | | RLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVAS |
9 | 5xtcr | 0.11 | 0.10 | 3.62 | 1.23 | CNFpred | | MWLAYTMAFMVKMPLY-GLHLWLPKAHVEAPI---AGSMVLAAVLLKLGGYGMMRLTLILNPLTMAYPFLVLSLWGMIMTSSICL----QTDLKSLIAYSSISHMALVVTAILIQT--WSFTGAVILMIAHGLTSSLLFCLANSNYER-LSQGLQTLLPLMAFWWLLASLA |
10 | 5doqA | 0.07 | 0.07 | 2.89 | 0.57 | HHsearch-2 | | IGSSASAMFITMVMNTPQGFELKIDPIVAMFNPAMPTKVAHVLSYMTSAFVLASIAWHLWKGNHLTMKTAFIFSVASALEWHFETSSRPPLYIHYLFDVMVTIGVVVAAVYWLGSIFRKNWFFGLLVAGGPLAMIIEAGWYLAEVGEGATTSAVDTMLV-LFCLLYIVLVI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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