Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MTRKEIKSLSKDKLRGRWTNFLLLVLIVSVVQGLVTYLISNIESIGVSSILNLGNSFLLGPFLESLLVVFVIKLVDRDDKIELKESIPSCKVWRNFIKKLLALILFELPISLIASVIAVVSLVSIISNHFYEYLFMASMNYEDILRDYIGIFIIIILIVAIYNIIVSLFFFPVKYIIVEEPELGIWEAVGKAFKMMKGHKWELFVLILSLIGWAILASLPLALGVIIVLLMNISVYILPIFSIALLWFIVYRDTIYRVYYLSISER |
1 | 6idpA | 0.09 | 0.09 | 3.42 | 1.23 | SPARKS-K | | ---QTSTSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGIQMVIIGIQVGLGIATTAVISRAIGAGKTEYKQLGGLVIVIGGIGVALIALVLYLVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLGIDGAAIATIIAFGVGIAIVAPKVAQRISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAK |
2 | 5tjvA1 | 0.11 | 0.11 | 3.76 | 1.35 | FFAS-3D | | -----LNPSQQLAI----AVLSLTLGTFTVLELLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHR---------KDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLLMFWIGVTSVLLLFIVYAYMYILWKAGKRAMSFSDQARMD---IRLAKTLVLILVVLIICWGPLLAIMVYDVFGKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRS |
3 | 3rkoB | 0.10 | 0.10 | 3.59 | 1.40 | CNFpred | | ------LSLTMLSVVTGVGFLIHMYASWYMYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYY-----TDPKNGAAAMKAFVVTRVGDVFLAFALFILYLNFREMV-MLMWATLMLLGGAVGKSAQLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLL--LAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHE |
4 | 5do7B2 | 0.07 | 0.06 | 2.68 | 1.13 | Neff-PPAS | | --TTLIRRQISNDFRDLPTLLIHGAEACLMSMTIGFLYFGHGSIQLSFMDTAALLFMIGALIPFNVILDVISKCYSERAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPFLLHFLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNSFYLAGGFMINL----------SSLWTVPAWISKVSFLRWCFEGLMKIQFSRRTYKMPLGLDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQKP |
5 | 5y78A | 0.10 | 0.09 | 3.36 | 1.04 | PROSPECTOR2 | | SPTLVHTLKV-------GFYFFLWYFFNFIFNIANKRTLNMWKY--------PWVLSTIQLGVGALYCTFLWVLGLRTKPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATGFITAMISNVAFVTRNIT------SKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLAKAKLP |
6 | 5t77A | 0.10 | 0.09 | 3.37 | 1.22 | SPARKS-K | | KSGEEKDKFLSSVINGFSLIILALVILSYFFPELIINLFGAGSSHETKILAKKLLLITSPSIYFIFLWAISYSILNTNNKFFWPALT------------PSISNITIIIGTFISPTIGFLIGSILMFFSIIKSIIHKYYFTIKHFPHFLKLFFPTFMTMVVSQI-----NTVVDMNVVSFYDKGSISYLQYASRFYLLPYGLFALKTTLFFTIPSMVGLIFLSTPIIRFFYEHSKDTLITSKILIAYTLGLPFYGIYSTISRSYHA |
7 | 4k5yA2 | 0.11 | 0.10 | 3.49 | 1.33 | FFAS-3D | | -------YHVAAII---NYLGHCISLVALLVAFVLFLRARSIRCLRNIIHANLIAAFILRNATWFVVQLTM----------SPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVAYDRLRAWMFICIGWGVPFPIIVAWAIGKYIYQGPMALVLLINFIFLFNIVRILMTKLRASTTSETIQARKAVK------ATLVLLPL-----------LGITYMLAFVNEVSRVVFIYFNAF-LESFQGFFVSVFACFLNS- |
8 | 3rkoC | 0.08 | 0.07 | 2.84 | 1.39 | CNFpred | | NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKATRITAATKFFIYTQASGLVMLIAILALVFVHYNGVWTFNYEELLNTPMS-SGVEYLLMLGFFIAFAVKMPVVPGWLPDAHSQAPTAGSV-----------DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL-----GVIGIFYGAWMAFAQ--TDIKRLIAYTSVSHMGFVLIAIYTGS----QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR |
9 | 5xjjA1 | 0.08 | 0.08 | 2.97 | 1.11 | Neff-PPAS | | --SGQLTAELKRVTRLAAPMATVTIAQYLLPVISVMVAGHNGELQLSGVALATSFTNVTGFSIMYGLVGALETLCGQAYGAK------------QYEKIGTYTYSAIASNIPICFIISIIWFYIENILISLGQDPDISRIAGSYAFWLIPVLFAQAIVIPLTRFLLTQGLVLPLLYTAV---TTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRFSSSCERGFVSEDFVSCVKQFFQYGVPSAAMICLEWWLFE |
10 | 6an7D | 0.11 | 0.09 | 3.39 | 1.02 | PROSPECTOR2 | | LSLELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIGTVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFT--------KIPIRLEVFPVVVIISELINYLIGISLVTLISFITL-----------GFEGIKYFYLFPVALYLMIVYSFSIGMVLGTLNVF---------FRDIKEIIGVFLQIFDILPPFVKKLIMYPVVSIHHLVFV-----------NYLDLHLYSLLGFLLASPLVFFVSYYFFEKDIKDF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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