Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MEAINVFLETASGRTRILYSADTCECPTQCRATARRAAASVLEELDKYIVVSESTFTLAVRDYDIFYYLCDRGRLSLAENEFYLFNHGLLFTDDAGEEPVTGVGFVITDSMHVHVKPREGIAVTVYSDNSRAY |
1 | 1yypA2 | 0.18 | 0.14 | 4.64 | 0.67 | SPARKS-K | | -------RESENSAVHVDLD------------------FGVVADLLKWIG-PTGTVQILVHAPAIKFILTNGSELEFTSNNRVSFHGVINVQLKVTKLPC-TLRIVTEHDTLLYVASRNGFAVENFLTEEP-- |
2 | 4gt8A | 0.12 | 0.10 | 3.49 | 0.57 | FFAS-3D | | ---------QKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEK-----LEQSYGLKNMRERAL----EIGATFHIVSLPDSGTRIEVKAPLNK-- |
3 | 3t0pA | 0.08 | 0.08 | 2.95 | 0.30 | HHpred | | AILECILIDASANEIKLA-NDELGIETIIDGTALAKIFSEIVRKLPD------NDVTIETDASFKTVISCEKAKFNIKSDDFSYIPYVEIVLSQSIDNDLTGELFEIEEN-KLRVVSLDGHRISIRYIEKN-- |
4 | 4aq1A5 | 0.07 | 0.06 | 2.55 | 0.75 | MUSTER | | -VLQDIKVDATS--VKLSDEAVGGGEVEGVNQKTIKVSA--VDQYGKEIKFGTKGKVTVTTNTEGLVIKVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTKTITVNVVNV----- |
5 | 5gslA | 0.06 | 0.05 | 2.33 | 0.76 | CNFpred | | --KVVGTIVRK-GKGSAVILGFRLQYYSSYHDMHRKFVDKILQLQ-REVEVSNRDIIAIPRIHYLVLVNPRDEEVAG---KVKYRGVEFEIKMK----GRGVLFIPVDVEIGVKLVYAT-ATPIGGGNRRIKF |
6 | 2rrfA | 0.23 | 0.08 | 2.59 | 0.71 | HHsearch-2 | | ------------------------------------------------------------------------GSSGSSGAEFY--DKQLKVL-------LSGATFLVTFGNS----EKPETMTCRLSNNQRYL |
7 | 4aq1A5 | 0.05 | 0.05 | 2.15 | 0.64 | Neff-PPAS | | ---VLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIK-VSAVDQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTKTITVNVVNV----- |
8 | 2kxoA | 0.16 | 0.10 | 3.24 | 0.48 | HHsearch | | MSLIELLFTVARDRLQIIIAQERAQQTP---DYLPTLRKALMEVLSKYVNVSLDNIRISQEKQD---------GMDVLELNIT-------LPEQKK--VL---E----------------------------- |
9 | 1ohfC2 | 0.09 | 0.08 | 3.20 | 0.56 | SP3 | | VHPFNVTRPGIAAGVTLTWASMPPGAPSGDPAWIPDSTTQFQWRHGGFDAPTGVITYTIPRGYTMQYFDTTTNEWNGFANP----DDVVTFGQTGGAAGTNATITITAPTLTILATTTSAANVINFRNLDAET |
10 | 4aq1A5 | 0.04 | 0.04 | 1.95 | 0.53 | PROSPECTOR2 | | V---LQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVS--AVDQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNAS----DTTPTSTKTITVNVVNV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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