Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | QNNLNNVTSVGSRLLGGALGLVGGIPGLVMLGAGAWYTMYQKQEQARQSALEYAATIDQVRANLNKMTLPETADNSGKTKESLAAQNKLVDEQRQKVEGLKSAIAGYQQMLASPGPSINGYLINHLISQEDAVKSLAAAQDELSVEQSRLNELSKKSEEIQSALKAVESQRDFLIRQQSAAQNNMRHSLLMVNAEHSEFNRIMSIGNQILTNRLALVNSPMRIPAAPLSEKQQDFIQKSERDKELSALTGEARVIRQAEFAADDIGLLNKPEFADNRQKYIDNQVAAYRNQEKL |
1 | 5j1iA | 0.11 | 0.11 | 3.91 | 1.01 | SPARKS-K | | ISELKDIRLQLEACETRTVHRLRLP-----LPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVEQLKEAQAVPATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERH---GEKVEECQRFAKQYILEKVQSGSESVIQEYVDLRTHYSELTTL |
2 | 2tmaA | 0.09 | 0.08 | 2.99 | 1.58 | FFAS-3D | | KLDKENALDRAEQAEADKKAA------------------EDRSKQLEDELVSLQKKLKGTEDELDKYSEADAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLAT----ALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQ---------AEKYSQKEDKYEEEIKVDKLKEAETRAEFAERSVTKL----EKSIDDLEDELYAQKLKYKAISEEL |
3 | 5nnvA | 0.10 | 0.07 | 2.80 | 1.16 | MUSTER | | ---------------------------------------------AKEEELAESSAISAKEAKIEDTKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQL-----------EEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLT----SESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKL-----QHGLDTYERELKEKRLYKQKTTLL |
4 | 5nnvA | 0.09 | 0.07 | 2.71 | 1.47 | Neff-PPAS | | ---------------------------------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEV-LKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES------SSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL |
5 | 2w6dA2 | 0.20 | 0.07 | 2.39 | 1.08 | HHsearch | | NILLNYFTVIGIGGIITAVGILLGPIGFALLGLGV--GFLQ-ADQARRELVKTAK--KELVKHLPQVAHEQSQVVYNAVKECFDSYEREVKRINDDIVSRKSELDNLVKQKQTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 2yfaA | 0.12 | 0.10 | 3.37 | 1.20 | PROSPECTOR2 | | GSHMGDIGQLNKDLTD-------------LRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTF------KSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARV---------------SMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSAN--EQAALRQLDAALADTDNLKRQ----------------LPSEDARLQQFEN--AVLAYRDAVRQFRDAVANITTS----RAEMTVQGADIVKRSDALYQIQLER |
7 | 5nnvA | 0.09 | 0.06 | 2.49 | 1.50 | FFAS-3D | | ----------------------------------------SAISAKEAKIEDTRDKIQALDESVD-----ELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAI------------------VQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFL--------TSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKL-----QHGLDTYERELKEKRLYKQKTTLL |
8 | 3i9wA | 0.10 | 0.09 | 3.37 | 1.08 | MUSTER | | -----PTMNMARQLSEASAWEL--FAAQNLTSA------EKMWQAQGRMLTAQSLKINALLQALREFDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQK--NAPTLEKQLNNAVKILQRRQI----------RIEDPGVRAQVATTLTTVSQYSDLLALQQDSEISNHLQTLAQNN-----IAQFAQFSSEVSQLVDTIELRNQ- |
9 | 3i9wA | 0.11 | 0.10 | 3.47 | 1.30 | Neff-PPAS | | ------TMNMARQLSEASAWELFAAQNLTSADN------EKMWQAQGRMLTAQSLKINALLQALREQGTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQK--NAPTLEKQLNNAVKILQRRQI----------RIEDPGVRAQVATTLTTVSQYSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQ----- |
10 | 5nnvA | 0.10 | 0.08 | 2.89 | 1.20 | PROSPECTOR2 | | AKEEELAES-------------------------------SAISAKEAKIEDTRDKIQALDESVD-----ELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAI------------------VQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTI---ELIALRRDQRIKLQ-------HGLDTYERELKEKRLYKQKTTLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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