Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KAKSKKIICALLLLGSILLGYFFWLSRHPVEIISVHQRNNYSDILVRNFPFTEKGKINWWLENRDMLKAKYSIPKPASDGFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTKNCIEKEKYMTIYKIKNDEPLFSFDGNRYFLNENNKIVKMK |
1 | 5amtA | 0.15 | 0.10 | 3.32 | 0.87 | SPARKS-K | | --------------------------GSHMDGLYINNNIPKTKIVLESKP------------DKNIFYSNYQISQRIYDDN--VKVLNLKTGKNEFP---------LDKD----IKDYALYFILPENKKYLISSDSNEFTIKNDSSIEKD- |
2 | 4jbdA2 | 0.11 | 0.08 | 2.89 | 0.56 | FFAS-3D | | --------------------------MKQIHVIDSHTGGEPTRLVMKGFPQSMAEQRDELRELHDRWRRACLLEPRGNDVLVGALYC---PPVSADATCGVIFFNNAGYLNMCQHLGLI------APGVHKIDTPVGQVTLHEDGAI---- |
3 | 3pieA2 | 0.15 | 0.10 | 3.34 | 0.26 | HHpred | | -------------RHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSERKPQDF-ERKEFRELKMTLKSNYAILLDDISALAKVVPVN---GLVRNSIPLQLIVEDVKNKDRYIEKE---------------------------------- |
4 | 5tgzA | 0.10 | 0.10 | 3.68 | 0.72 | MUSTER | | PHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAVAKALIVYGSTTGNTEYTAETIARELADADAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQ |
5 | 3hjfA | 0.11 | 0.09 | 3.38 | 0.56 | CNFpred | | EEERHRWENALLGLLAKAGLQVVALS-PAELAVGFDAGGRFGGAACAVG-IPQEVVWDLLEETLWAFRRKAGR------LPSRVLLLREGR-------VPQDEFALALE--ALAR-IAYDLVSVRKGGGRVYPV-DGLYVPLEDKTFLLLT |
6 | 1tueB2 | 0.14 | 0.05 | 1.58 | 0.66 | HHsearch-2 | | ------------------------------------------------------------------------------------------------------CEELWTEPTHCFKKGQTVQVYFDGNNCMTYVAWDSVYYMTDAGTWDKTA |
7 | 5lq6A | 0.14 | 0.12 | 4.09 | 0.67 | Neff-PPAS | | -RDNLKQMARYVNNCVLLSACLHYNIHHRQDILSSKLDSAIVDKIIFGHELNQSYSLNSIDEVEKEILNRYDIKRES---SFIISAENYIAPISEYDKKPYVQFIDSWKTSNILPSLQEIKKHFSSSGEFYVRAYD--------------- |
8 | 1tueB2 | 0.15 | 0.05 | 1.57 | 0.44 | HHsearch | | ------------------------------------------------------------------------------------------------------CEEWNTEPTHCFKKGQTVQVYFDGNNCMTYVAWDSVYYMTDAGTWDKT- |
9 | 3elqB2 | 0.11 | 0.09 | 3.37 | 0.76 | SP3 | | -------------IVNNYMDNRSISDLQQTKVIKVAPGFEDRLYLVNTHFTAQGSDLHWHGEKDKNAGILDAGPATGADIAPFTFIVD-TEGWLDQDTF----YDGRDRDIN--KRGYLMGIRETPRGTFTAVQGQHWYEFDMMGQVLEDH |
10 | 3cvzA2 | 0.09 | 0.09 | 3.26 | 0.58 | PROSPECTOR2 | | IITNQADAEAIVTKL---------NSLNEKTLIDIATKDTFGMVSKTQDSEGKNVAATKALKVKDVATFGLK-SGGSEDTGYVVEMKAGAVEDKYGKVGDSTAGIAINLPSTGLEYAGKGTTIDFNKTLKVDVTGGSSAVAVSGFVTKDDT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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