Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFAACCLAIVFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITLAFIWNEVQLITVGIGVALLMNLYM |
1 | 5edlA | 0.13 | 0.13 | 4.64 | 1.06 | SPARKS-K | | WKVKEIVIMSVISIVFAVVYLLFTHGPIAYEPIYGIWFIVSVIAAYMIRKPGAALVSEIIAALVECLLGNPSGPMVIVIGIVQGLGAEAVFLATMLAGMGSSVASFIYDLFVSGSPGYLLIMLVIRLISGALLAGLLGKAV |
2 | 3rkoC | 0.16 | 0.16 | 5.16 | 1.03 | CNFpred | | -----VEYLLMLGFFIAFAVKMPVV-PLHGWLPDAHSQAPT-AGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMALIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG |
3 | 6a2jA3 | 0.12 | 0.09 | 3.23 | 1.51 | SP3 | | LQIGKKMQFHMIGILIYSYIVVLLLF---VWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFG----VLCYFLLLIARFRYES----------------------------- |
4 | 4mndA2 | 0.06 | 0.06 | 2.72 | 1.04 | SPARKS-K | | TRISAAIQMTLISFLVGAFSALASFFSIPLAGLLYQFSSILDGCDGEIARAYVDSILDRFVDFLFLAIIALLYPKTATVAMFAIFGSVMVSYTSEKYKAEFRIFLIMIFCLLSAISLQWIFWMFLFVAAISLTRVVVTLLA |
5 | 4fc4A | 0.12 | 0.11 | 4.04 | 0.93 | FFAS-3D | | ---SVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTLGVTISHGQMWAILPQTWLGNLVGSLVCLAIWMAIRTEGTAKFLAIWWCLLAFIASGYEHSVANMTLFALSWFGSDAYTLAGIGHNLLWVTLGNTLSGLGYWYA |
6 | 4q2eA | 0.08 | 0.05 | 1.96 | 0.22 | HHpred | | RKSLEGVIGFLGVVIYTFLYRLVVVICFRTFLPFAATVAIMDTFGDIFECALKRHYGVKD-------SGKTLPGHGDGLLFVAPVSYIVFKILEG---------------------------------------------- |
7 | 4hzuS | 0.19 | 0.17 | 5.51 | 0.93 | MUSTER | | GSL-KENTIAAVLIAMTVALSILVVIPTLCEVGIYTSAILYGRR-----------MGLLVGGASGFLIDILTGYCLFSLVIHGTQGLVVGWLLPRHHVMVIGYCLATTLLFGWPAGLASIFGNVVQVGFGAGVTLSIVGPL |
8 | 3rkoB | 0.10 | 0.09 | 3.43 | 1.03 | CNFpred | | -----MLMWATLMLLGGAVGKSAQ-LPLQTWLADAMA---GPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAAVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVI |
9 | 6iu3A | 0.14 | 0.12 | 4.11 | 0.53 | HHsearch-2 | | NASSSIVLTAGIAEVAAGAISGYLAAKPQAWLDFMMKFELKPDPKRALQSAFTIAIAYVLGGLVPLIPYMFIPVAR--------------------KAVVASVLTLMALLGTDNKPFKSALQTALIGAIASAAAFGMAKAV |
10 | 5kbwA | 0.10 | 0.09 | 3.45 | 1.00 | Neff-PPAS | | --PQASFLKYDPSEIPALIVSFLLG---PGVGMFVVLVKDILFFLMKSGDPVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFAT-AFALGLNALIVPLYFEAPFELYLKFFPFILAFNLVKFGIDSVVTFFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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