Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | PLSVVSQRYQVVQPREVLEFYRDLTERSGYELETAGVLKGGRKLWALARTGQSTALKGNDVVNGYLLLATSCDGTLATTATPTTIRVVCNNTLTIAINGASQAIKVPHSTRFDPRTVKQQLGITVSQWDDFMYRMRTLAARPVKDHEAKAYLRSVLCEVQTDKPEHTGLSNERALNKVLSMYEGHGRGAELESAKGTAWGLLNSVTEYVDHERRARSNEYRMDAAW |
1 | 5cwcA | 0.14 | 0.10 | 3.33 | 0.65 | SPARKS-K | | KRKGDDTEEAREAAREAFELVREAAERAG--------------------------IDS-------------------------------SEVLELAIRLIKECVENAQREGYD---ISEACRAAAEAFKRVAEAAKRAG---ITSSEVLELAIRLIKEREGYDISEACRAAAEAFKRVAEAAKRAGITSS-----ETLKRAIEEIRKRVEEAQREGNSEACRQAAE |
2 | 4l4hA2 | 0.15 | 0.07 | 2.23 | 0.81 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------EESRTARVIRSTVFLFNRFIRGLDALSKIDLPIESVSLSLQDLFHPPDEHLEHEDKQNRLRALKNRQNLFQEEG--------------MINLVLECIDRLHVYSSAAHEAGESW |
3 | 1h8lA1 | 0.10 | 0.09 | 3.24 | 0.26 | HHpred | | --AVQPVDFRHHHFSDMEIFLRRYANEPSTRLYSVGKSVELRELYVM-EISDNPG--IHEAGEPEFKYIGNMHGNEVVGRE------LLLNLIEYLCKNQSTRIHIMPSMNPDGYEKSQEGDRGTGRNNSNNYDLNRNFVTDPPQPETLAVMSWLKTYPFVLSPDESKSPDDAVFQQLALSYSKSPCKDYWYNVPGGMQDWNYL---------------------- |
4 | 5cwqA | 0.14 | 0.13 | 4.50 | 0.72 | MUSTER | | ELERESEE----RLQEARKRSEEARERGDLKELAEALIEEARAVQELARVGNSEEAERASEKAQRVLEEAR-DDEVLALALIAIALAV-LALAEVACCRG------------NSEEAERASEKAQRVLEEARKVSEEAREQGDDALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGD-SEVKRLAEEAEQLAREARRHVQECRGGW |
5 | 3wqyA | 0.09 | 0.07 | 2.71 | 0.59 | CNFpred | | ----------IYWKNETVAYCTELLNELGVDIVYKEEPWAGGNAGPCLEAIV-------GGLEVATLVFMNLEEARYRKMDNYIVDTGGLERFVWASKGTPTVYDAI-----FPEVVDTIIDNSNV-DERVRRIVAESSK-ELRGERLNQLRKSVADTV-------SVEELEGIVVPLEKVYSL-----------DHTRCILFMLGDGLVPSN---GAGYLARLMI |
6 | 1vt4I | 0.13 | 0.13 | 4.46 | 0.38 | HHsearch-2 | | YNNQVFAKYNVSRLQPYLKLRQALLELRPALIDGVQCKMDFKIFWLNLKNCNSPETPSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFFLSAA--TTTHISLDHHMTLTPDEVKSIIESSLNEPAEYRKMFDRLSVFPPSASDVMVVVNKYSLVEKQPKEEVKLENEYALHRSIVDHYERHDSTAWICDNDPKYERLVNAILDFLPKIEENCSDLLRIALMA |
7 | 5cwpA | 0.13 | 0.12 | 4.01 | 0.71 | Neff-PPAS | | ------------RAKEAAERAQEAAERTG----DPRVRELARELKRLAEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPRELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGD-----PEKREKARERVREAVERAEEVQRDPSGW |
8 | 4a37A2 | 0.09 | 0.08 | 3.16 | 0.48 | HHsearch | | --------FEPYSRERHARLVERALGIEGVERLAVGTSVQGRDIELL-RVRR------HPDSHLKLWVIAQQHPGEHMAEWFGLIERLQRPTEQRLLE--KADLYLVPNMNPDGAFHGNL------RTNAAGQDLNRWLPSAERSPEVQQEMKRHHVFAAGCNPG-YTPRLERLEQRFREELMARGIRHGYPANLALAFVGQTYDCLAFTIEMPFKDSGARSKRL- |
9 | 4eqyA | 0.15 | 0.10 | 3.27 | 0.71 | SP3 | | WIMHIGHD-CRV--------------GSHVVLSSNAQMAGHVEI---AIVGGMSGVHQYVRIGAHSMLG----GASALVQDIPP--------FVIAAGNKAEPHGIN-------VEGLRRRGFSPDAISALRSAYRILYKNSLSLEEAKVQLSELAQAGGD---------GDAAVKALVDFVESSQRGIIR----------------------------------- |
10 | 5ighA | 0.14 | 0.12 | 4.21 | 0.80 | PROSPECTOR2 | | T----------VVTTADTSQLYALAARHGLKLHGIATVDDGRRWVLRIPRRAPFAVPDWRVANAELVAYPLEDSTAV--------------------IQPGSSTPDWVVPQDSEVFAESFATAPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSWPDFSHLVFGEEGLAKLLLTYEAAGGRVWPRLAHHIARLAFGAVTYALFALDSGNEEKAQLAAAE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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