Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IKTELRPSYGLPLLQSGLYNTNQIFQKTQTLPPFIQDSNSTLPAPSTTNLPETNKLASHLQHRLSRSLLSANTTTPKTGGELRGLPTDDPWVVAGFVTLGVVAGGLVLILCYLYTPCCAYLVILCCWFKKWGPY |
1 | 1lajC | 0.13 | 0.13 | 4.38 | 0.74 | SPARKS-K | | GYTYTSLDVRPTRTEKDKSFGQIIPVPVSEYPKKKVSCVQVRLNPSPKRLDETTLLTSENVFKLFLAVLIHVPTGIQPNNKITFDMSNVG------AEIGDMGKYALIVYSKDDVLEADEMVIHIDIEHQRIPS |
2 | 1mpxA2 | 0.11 | 0.07 | 2.69 | 0.41 | FFAS-3D | | ----ARTPLKVPTWLQGLWDQEDAIHSYAAEPRDKRNTLNYLVGPWRHEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRL---------------------------------------- |
3 | 2pd0A | 0.10 | 0.04 | 1.37 | 0.28 | HHpred | | --------------------------------------------------IKSKY----LDIILSKECEKESSINCCLQDILDDREKNPDWYIISIKAQNES-------------------------------- |
4 | 3zpeA | 0.17 | 0.16 | 5.16 | 0.72 | MUSTER | | TKTAKVLRYKFVRWDALLIIQFIDNIGVMENPTFYRNKSIELRSADFLSPMLNNTYIVPLNG-------GVRVESPTIPVQLEVILENNSFIQVGFVRLTVKNGNHMIIQCNPVPGNIKMIKIKMLFTCLIG-- |
5 | 6f34A | 0.12 | 0.04 | 1.31 | 0.63 | CNFpred | | ---------------------------------------------------------------------------------------------YSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLL |
6 | 6oqqA4 | 0.20 | 0.07 | 2.14 | 0.42 | HHsearch-2 | | FTDKLVSGVGLSVDDLGGYNRESPLRELEKL---L-YATVTLIEGTMQ-------------------------------------------------------------------------------------- |
7 | 3j9aA | 0.14 | 0.08 | 2.81 | 0.76 | Neff-PPAS | | -----NFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRD-----HLQTLRDQKP-------------------------------------------- |
8 | 2xzlA2 | 0.13 | 0.07 | 2.34 | 0.32 | HHsearch | | ----------------------------------SQEHIVSWS----L---ALNN---RHLASFT---------KVAIGDEMILWYSGPDWEGRGYIVR-LPNDTFTLELKPPPTHLTTGFAEFI--------- |
9 | 3iynQ | 0.12 | 0.11 | 3.96 | 0.56 | SP3 | | IVSSY-LTTRMP-PWAGV-RQNVMGSSIDGRPVLPANSTTLTYETVSGTPLETAASAAASAAAATARGIVTDFAFLSP-----LASSAASRSSARDDKLTALLAQLDSLTRELNV-VSQQLLDLRQQVSALKAS |
10 | 2kr6A | 0.10 | 0.10 | 3.62 | 0.56 | PROSPECTOR2 | | MGDPEAQRRVSKNSKYNAESTERESQDTVAENDDGGFSEEWEAQRDSHLGPHRSTPESRAAVQELSSSILAGEDPEERGVKLGLGDASGDWNTTIACFVAILIGLCLTLLLLAIFKKATFGLVFYFATDYLVQI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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