Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FEIQPVLPSEQVDNSLHYYDVNYEPGTTHVIKMKVQNFTDHEMTLKSDFQNGMTQDGGGMKFQQSIKNLDVSLKIPFTTVASIKKADQTIKLGPKEATTISATIKMPKQKFDGMIAGGWHFI |
1 | 3eifA4 | 0.15 | 0.12 | 4.15 | 1.07 | MUSTER | | -TMYVTDKDN----TSSKVHLNNVSD-KFEVTVTVHNKSDKPQELYYQATVQTDKDGKHFALAPK---------------ALYETSWQKITIPANSSKQVTVPIDASAQMKNGFLEGFVRFK |
2 | 3eifA | 0.13 | 0.11 | 3.70 | 1.19 | CNFpred | | ATMYVTDK----DNTSSKVHLNNV-SDKFEVTVTVHNKSPQELYYQATVQTDKVD-GKHFALAPKA---------------LYETSWQKITIPANSSKQVTVPIDASRF-KNGYFLEGFVRF |
3 | 3eifA4 | 0.15 | 0.12 | 4.11 | 1.01 | Neff-PPAS | | ----------DKDNTSSKVHLNNVSD-KFEVTVTVHNKSDKPQELYYQATVQTDKVDG--------------KHFALAPKALYETSWQKITIPANSSKQVTVPIDASRFKNGYFLEGFVRFK |
4 | 3eifA4 | 0.13 | 0.11 | 3.69 | 1.22 | HHsearch | | ----TMYVTD--KDNSSKVHLNNVS-DKFEVTVTVHNKSDKPQELYYQATVQTDKDGKHFALAP-------------KALYETS--WQKITIPANSSKQVTVPIDASRFMKNGYFLGFVRF- |
5 | 5dfkA1 | 0.11 | 0.08 | 2.98 | 0.97 | SPARKS-K | | ------------MLDVGDISSFMNSDSS-TLSKTIQNSTDSGRLINIRLERLSSPLDDGQV--IAMDKPD---------ELLLTP--ASLLLPAQASEVIRFFYKGPADEK--ERYYRIVWF |
6 | 5dfkA1 | 0.11 | 0.09 | 3.22 | 0.98 | FFAS-3D | | ----------MLDVGDISSFM---NSDSSTLSKTIQNSTDSGRLINIRLERLSSPLDDGQVIAMDKPDE-------------LLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQ |
7 | 3eifA4 | 0.14 | 0.11 | 3.93 | 0.89 | HHpred | | ----TMYVTD-KDNTSSKVHLNNVS-DKFEVTVTVHNKSDKPQELYYQATVQTDVDGKHFALA-------------PKALYETS--WQKITIPANSSKQVTVPIDASRFMKNGYFLEGFVRF |
8 | 1w8nA2 | 0.18 | 0.12 | 4.01 | 0.93 | MUSTER | | ICAPFTIPD-----------VALEPGQQVTVPVAVTNQSGIAVP------------KPSLQLDASPD---------------WQVQGSVEPLMPGRQAKGQVTITVPAGTTPGRYRVGATLR |
9 | 1xf1A | 0.12 | 0.10 | 3.48 | 1.19 | CNFpred | | ATMYVTDK----DNTSSKVHLNNV-SDKFEVTVNVHNKSDKPQELYYQATVQTDKVDKHFALAP-------------KVLYETS--WQKITIPANSSKQVTVPIDASRF-KNGYFLEGFVRF |
10 | 5dfkA | 0.12 | 0.09 | 3.20 | 0.85 | HHsearch-2 | | ----------MLDVGDISSFMN---SDSSTLSKTIQNSTDSGRLINIRLERLSSPLDDGQV-----------IAMDKPDELLLT--PASLLLPAQASEVIRFFYKGPADE--KERYYRIVWF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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